Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d24
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   7.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   9.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 362 PIISNSPCIFVIILFPISIRNSWLVLYQSRSS 457
           P++ N+P +++I +  I I   W   + S +S
Sbjct: 2   PLVENNPTLYLIPVSVILISVGWWENFVSETS 33


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 362 PIISNSPCIFVIILFPISIRNSWLVLYQSRSS 457
           P++ N+P +++I +  I I   W   + S +S
Sbjct: 235 PLVENNPTLYLIPVSVILISVGWWENFVSETS 266


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 362 PIISNSPCIFVIILFPISIRNSWLVLYQSRSS 457
           P++ N+P +++I +  I I   W   + S +S
Sbjct: 235 PLVENNPTLYLIPVSVILISVGWWENFVSETS 266


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
 Frame = -2

Query: 168 FHFISISTTNQTIFVNKTYPV--IHTENNF 85
           F +I  S+ +   F NKTY    +  EN+F
Sbjct: 558 FAYIDESSNSSNYFANKTYDFHNMSFENDF 587


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 8   NRSAFQVCHVLSYLSRLINAIA 73
           +R  F V H+L  LSR I+++A
Sbjct: 467 SRLNFSVEHLLMELSRAIDSVA 488


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -1

Query: 688 ALQANCAGARESQPT 644
           ALQ NCA   E Q T
Sbjct: 67  ALQTNCAKCTEKQRT 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,164
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)