Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d24
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    27   0.74 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   0.97 
EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.        24   5.2  
DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.        24   5.2  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    24   5.2  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   9.1  

>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 13/47 (27%), Positives = 25/47 (53%)
 Frame = -2

Query: 456 LERDWYNTSHELRIEIGNKIITNMHGLFDIIGARGLCHSQKISNIWK 316
           L+R + +   +L +  G+ + T +  LF+ +  + LC+ Q    IWK
Sbjct: 70  LDRQFRDLGGQLLVFRGDSV-TVLRRLFEELNIKKLCYEQDCEPIWK 115


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 15  VLFKSAMFCPICRA*STRSRSLFKNC 92
           V F     CP+CRA  TRS +L  +C
Sbjct: 518 VHFPGRFECPLCRATYTRSDNLRTHC 543


>EF117200-1|ABL67437.1|  421|Anopheles gambiae serpin 1 protein.
          Length = 421

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 376 VRYNRCTWVVSFPKNQQHLEKYNISLNVSDTATKFLR 266
           V + + +W  SFP +Q H   ++++ +     T+F+R
Sbjct: 197 VLFLKASWKNSFPDDQTHNRTFHVA-DGDTVTTEFMR 232


>DQ974160-1|ABJ52800.1|  235|Anopheles gambiae serpin 1 protein.
          Length = 235

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = -1

Query: 376 VRYNRCTWVVSFPKNQQHLEKYNISLNVSDTATKFLR 266
           V + + +W  SFP +Q H   ++++ +     T+F+R
Sbjct: 11  VLFLKASWKNSFPDDQTHNRTFHVA-DGDTVTTEFMR 46


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 587 FCRCSAHGAHVTRDECLGVSRLRLA 661
           F R  A+GA + R+E  GVS+  LA
Sbjct: 151 FTRARAYGAILERNEPRGVSKFILA 175


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 677 ELCRRPRVAAD*HPNTRPLSRVRRVRCTDK 588
           + C   R+ AD    T+PLS+V+ V C  K
Sbjct: 904 QYCPSERMIAD--ALTKPLSKVKLVTCRKK 931


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,680
Number of Sequences: 2352
Number of extensions: 15636
Number of successful extensions: 27
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)