Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d24
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.6  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   8.4  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   8.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   8.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   8.4  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 343 FPKNQQHLEKYNISLNVSDTATKFLR 266
           +P N+  L+++N  LN    ATK+LR
Sbjct: 95  YPPNK--LQQWNEDLNWQPIATKYLR 118


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -1

Query: 343 FPKNQQHLEKYNISLNVSDTATKFLR 266
           +P N+  L+++N  LN    ATK+LR
Sbjct: 110 YPPNK--LQQWNEDLNWQPIATKYLR 133


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 109 GICFVYKYSLVGSANTYKMKLFNESISL 192
           G   V+ + L+G   T + KL+ E+ +L
Sbjct: 336 GNTLVFLFDLIGRNPTVQNKLYEETYAL 363


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 203 QLCSSYYIKFCICLMPRN*LYSEKFRR 283
           Q  SS+Y +   C   RN  Y EK RR
Sbjct: 225 QHTSSHYSRERSCSRDRNREYKEKDRR 251


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 244 QANTKFNVIRTTQLHTPVTI 185
           +A+  F++  T Q H PVT+
Sbjct: 244 EAHCYFDIEPTVQQHQPVTV 263


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 17/76 (22%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = -3

Query: 635 NTRPLSRVRRVRCTDKTLTTTNYTHNMIRN--RCQLFRNN*LLKSETHGKRHNARRGSPL 462
           +T+ L   R  R +D      +  + +IRN    +  RN+ L  +ET+  +HN ++ +  
Sbjct: 339 DTQFLQVCRSRRHSDSCCLCLDSMNAVIRNFNESENRRNSCLGSTETYYSKHNTQQFTQY 398

Query: 461 LDSNETGTIRATNYEL 414
           +  + +     T  +L
Sbjct: 399 IPESSSNLQEKTKIDL 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,013
Number of Sequences: 438
Number of extensions: 4874
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)