Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d22
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113381-1|AAM29386.1|   82|Drosophila melanogaster RE03722p pro...    46   5e-05
AE014296-1615|AAN11959.1|   82|Drosophila melanogaster CG32039-P...    46   5e-05
AY128496-1|AAM75089.1|  555|Drosophila melanogaster RH44244p pro...    32   0.95 
AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-P...    32   0.95 
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P...    32   0.95 
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    30   3.8  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    30   3.8  
AY075283-1|AAL68150.2|  293|Drosophila melanogaster AT30334p pro...    29   8.8  
AE014134-1940|AAF52999.1|  281|Drosophila melanogaster CG17118-P...    29   8.8  

>AY113381-1|AAM29386.1|   82|Drosophila melanogaster RE03722p
           protein.
          Length = 82

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +2

Query: 179 MGIFTSCCKPSAADV-ITPDAETXXXXXXXXXXXXXXXXXXXGVKDLEKIKRMQQKSEEI 355
           MG   SCC  SA +  + P  E                    G+K+ + ++R QQ++EE+
Sbjct: 1   MGACLSCCGQSAEETNLMPSPEERRQQQLDAAKKRRQENEHRGIKNPDSVRRQQQRAEEM 60

Query: 356 ERREKELA--SQGGATLKW 406
           +RRE+E A   QG + L+W
Sbjct: 61  QRREEEAARQGQGQSNLRW 79


>AE014296-1615|AAN11959.1|   82|Drosophila melanogaster CG32039-PA
           protein.
          Length = 82

 Score = 46.0 bits (104), Expect = 5e-05
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
 Frame = +2

Query: 179 MGIFTSCCKPSAADV-ITPDAETXXXXXXXXXXXXXXXXXXXGVKDLEKIKRMQQKSEEI 355
           MG   SCC  SA +  + P  E                    G+K+ + ++R QQ++EE+
Sbjct: 1   MGACLSCCGQSAEETNLMPSPEERRQQQLDAAEKRRQENEHRGIKNPDSVRRQQQRAEEM 60

Query: 356 ERREKELA--SQGGATLKW 406
           +RRE+E A   QG + L+W
Sbjct: 61  QRREEEAARQGQGQSNLRW 79


>AY128496-1|AAM75089.1|  555|Drosophila melanogaster RH44244p
           protein.
          Length = 555

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 305 VKDLEKIKRMQQKSEEIERREKELASQGGATLKWTAE*DTEERASVNKQEKYRYK 469
           VK+ EK +  +++ E+   +EKE  +QG A    TA  D E +A+    +K R K
Sbjct: 389 VKEKEKERLKEKEIEKAMEKEKEKDAQGAAASTSTAATDDEAKAAELAAKKSRLK 443


>AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-PB,
            isoform B protein.
          Length = 1259

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 305  VKDLEKIKRMQQKSEEIERREKELASQGGATLKWTAE*DTEERASVNKQEKYRYK 469
            VK+ EK +  +++ E+   +EKE  +QG A    TA  D E +A+    +K R K
Sbjct: 1093 VKEKEKERLKEKEIEKAMEKEKEKDAQGAAASTSTAATDDEAKAAELAAKKSRLK 1147


>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
            isoform A protein.
          Length = 1338

 Score = 31.9 bits (69), Expect = 0.95
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +2

Query: 305  VKDLEKIKRMQQKSEEIERREKELASQGGATLKWTAE*DTEERASVNKQEKYRYK 469
            VK+ EK +  +++ E+   +EKE  +QG A    TA  D E +A+    +K R K
Sbjct: 1172 VKEKEKERLKEKEIEKAMEKEKEKDAQGAAASTSTAATDDEAKAAELAAKKSRLK 1226


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +2

Query: 305 VKDLEKIKRMQQKSEEIERREKEL 376
           +KDLEK  ++++K E+++ +EKEL
Sbjct: 101 LKDLEKEVKLKEKEEQLKEKEKEL 124


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +2

Query: 305 VKDLEKIKRMQQKSEEIERREKEL 376
           +KDLEK  ++++K E+++ +EKEL
Sbjct: 704 LKDLEKEVKLKEKEEQLKEKEKEL 727


>AY075283-1|AAL68150.2|  293|Drosophila melanogaster AT30334p
           protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 201 QHDVKIPILILFYRNSHEKYCFFV 130
           Q  +K+P L+L  +N H+ +CF V
Sbjct: 80  QLGIKLPFLVLLIKNMHKYFCFEV 103


>AE014134-1940|AAF52999.1|  281|Drosophila melanogaster CG17118-PA
           protein.
          Length = 281

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 201 QHDVKIPILILFYRNSHEKYCFFV 130
           Q  +K+P L+L  +N H+ +CF V
Sbjct: 68  QLGIKLPFLVLLIKNMHKYFCFEV 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,758,652
Number of Sequences: 53049
Number of extensions: 490606
Number of successful extensions: 1285
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)