Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d19
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   0.74 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   6.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.2 bits (50), Expect = 0.74
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 393  WKTAFQATKCWTTSIWNMTTALILTFTMNTNRP 491
            W ++   +  WTT+    TT    T T  T RP
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRP 1074



 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 148  FKHEACAIFYRRKRDTVTTDNC 83
            + HE+C+ FY      +   NC
Sbjct: 1213 YPHESCSSFYVCVNGHLVPQNC 1234


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 8   YQTFIMDGVKLLGTCALIILL 70
           Y  FI+  + LL  C LIILL
Sbjct: 216 YSAFIIFTIHLLFYCVLIILL 236


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = +2

Query: 233 NNIKSKIELYEAQVSTCKNVRQIKQNRSSNIKTRIEKQLQ 352
           N +K  +EL+E         ++  +  S NIK  I +  Q
Sbjct: 404 NLVKKCLELFEELAEDKDGYKKFYEQFSKNIKLGIHEDSQ 443


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 201 NSILLRCCKSSIIS 242
           NSI +RC +S++IS
Sbjct: 73  NSIQIRCIESNMIS 86


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 431 IDLEYDDGVDFDV 469
           ID +YD+ VD+ V
Sbjct: 260 IDRKYDENVDYQV 272


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = +2

Query: 356 LTPLNKNFITYSVEDSISSNEVLDNIDLEYDDGVDFDVYDEYE 484
           L PLNK     S   ++     LD  D    +  DF  Y  Y+
Sbjct: 391 LNPLNKGTEADSSFVTLPQLHSLDEWDDTLKEKADFQYYVSYD 433


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,495
Number of Sequences: 336
Number of extensions: 2129
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)