Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29d18
(582 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41482 Cluster: Uncharacterized 13.3 kDa protein in P6.... 185 6e-46
UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in P6.... 83 4e-15
UniRef50_P24652 Cluster: Uncharacterized 12.2 kDa protein in P6.... 82 1e-14
UniRef50_Q4KSY5 Cluster: P12; n=2; Nucleopolyhedrovirus|Rep: P12... 67 3e-10
UniRef50_Q00732 Cluster: p48 protein; n=16; Nucleopolyhedrovirus... 60 4e-08
UniRef50_Q9YMM4 Cluster: LdOrf-103 peptide; n=1; Lymantria dispa... 51 2e-05
UniRef50_Q287K2 Cluster: P12; n=3; Nucleopolyhedrovirus|Rep: P12... 50 3e-05
UniRef50_Q0N414 Cluster: P12; n=1; Clanis bilineata nucleopolyhe... 50 5e-05
UniRef50_Q9J871 Cluster: ORF64; n=5; Nucleopolyhedrovirus|Rep: O... 48 1e-04
UniRef50_Q99GV9 Cluster: ORF93; n=3; Nucleopolyhedrovirus|Rep: O... 47 3e-04
UniRef50_Q91BD5 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q80LL9 Cluster: Budded virus/occlusion-derived virus st... 47 3e-04
UniRef50_P24651 Cluster: p48 protein; n=7; Nucleopolyhedrovirus|... 47 3e-04
UniRef50_Q0IL13 Cluster: ORF106; n=2; Nucleopolyhedrovirus|Rep: ... 46 5e-04
UniRef50_Q80LL8 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_Q8V5R3 Cluster: ORF92; n=4; Nucleopolyhedrovirus|Rep: O... 45 0.001
UniRef50_A0EYY4 Cluster: P12; n=1; Ecotropis obliqua NPV|Rep: P1... 45 0.002
UniRef50_Q9YMM5 Cluster: LdOrf-102 peptide; n=1; Lymantria dispa... 39 0.075
UniRef50_A0EYY3 Cluster: P40; n=4; Nucleopolyhedrovirus|Rep: P40... 38 0.17
UniRef50_Q4QDY2 Cluster: Putative uncharacterized protein; n=2; ... 36 0.70
UniRef50_Q12267 Cluster: Structural maintenance of chromosomes p... 34 2.8
UniRef50_Q8JG61 Cluster: Protein 4.1; n=1; Danio rerio|Rep: Prot... 33 3.7
UniRef50_Q31FP5 Cluster: Methyl-accepting chemotaxis protein pre... 33 4.9
UniRef50_A0BSA1 Cluster: Chromosome undetermined scaffold_124, w... 33 4.9
UniRef50_Q6UPR1 Cluster: NIMA-related kinase 5; n=1; Chlamydomon... 33 6.5
UniRef50_Q3LS85 Cluster: 185/333; n=79; Strongylocentrotus purpu... 33 6.5
UniRef50_Q8NG66 Cluster: Serine/threonine-protein kinase Nek11; ... 33 6.5
UniRef50_A3IXJ5 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A1ZWD4 Cluster: Valyl-tRNA synthetase; n=3; cellular or... 32 8.6
UniRef50_A0D7G9 Cluster: Chromosome undetermined scaffold_4, who... 32 8.6
>UniRef50_P41482 Cluster: Uncharacterized 13.3 kDa protein in
P6.9-VP48 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 13.3 kDa
protein in P6.9-VP48 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 122
Score = 185 bits (451), Expect = 6e-46
Identities = 99/123 (80%), Positives = 102/123 (82%)
Frame = +1
Query: 64 MIASINDIDDMDTGNNMSQTXXXXXXXXXXXXXXQTQMAAVDMLQTINTTASQTAASLLI 243
MIASIND D MDT +NMSQ QTQMAAVDMLQTINT ASQTAASLLI
Sbjct: 1 MIASINDTD-MDTDDNMSQARRNRRNRPPARPSAQTQMAAVDMLQTINTAASQTAASLLI 59
Query: 244 NDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQVI 423
NDITPNKTESLKILSTQSVGAR+LLEPMQAN + IKLNRIETVNVLDFLGSVYDNTIQVI
Sbjct: 60 NDITPNKTESLKILSTQSVGARSLLEPMQANASTIKLNRIETVNVLDFLGSVYDNTIQVI 119
Query: 424 VTE 432
VTE
Sbjct: 120 VTE 122
>UniRef50_P25695 Cluster: Uncharacterized 41.5 kDa protein in
P6.9-VP48 intergenic region; n=13;
Nucleopolyhedrovirus|Rep: Uncharacterized 41.5 kDa
protein in P6.9-VP48 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 361
Score = 83.4 bits (197), Expect = 4e-15
Identities = 37/38 (97%), Positives = 38/38 (100%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCDEHQ 568
MSAIALYLEINKLRLKIDEPMQLAIWPQ+FPLLCDEHQ
Sbjct: 1 MSAIALYLEINKLRLKIDEPMQLAIWPQLFPLLCDEHQ 38
>UniRef50_P24652 Cluster: Uncharacterized 12.2 kDa protein in
P6.5-VP48 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.2 kDa
protein in P6.5-VP48 intergenic region - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 112
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/85 (48%), Positives = 56/85 (65%)
Frame = +1
Query: 169 TQMAAVDMLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKI 348
TQ+AA +ML +N ++TAAS ++ D + NK SL L QS+ AR L+E +QA I
Sbjct: 27 TQLAAAEMLHNMN--GAETAASFIVKDASENKIASLTTLGNQSIAARKLVESLQAGAPTI 84
Query: 349 KLNRIETVNVLDFLGSVYDNTIQVI 423
KLNR +TVNVL FL VY N ++V+
Sbjct: 85 KLNREDTVNVLKFLNDVYTNQLEVV 109
>UniRef50_Q4KSY5 Cluster: P12; n=2; Nucleopolyhedrovirus|Rep: P12 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 117
Score = 66.9 bits (156), Expect = 3e-10
Identities = 28/83 (33%), Positives = 51/83 (61%)
Frame = +1
Query: 175 MAAVDMLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKL 354
M + + LQ +N T T A +++ND P K +++++S QS A+ +LE + E I+L
Sbjct: 35 MNSAEFLQNLNQT--NTVADVILNDTNPQKRNAIRVISKQSAIAKTILEAISNEEQSIRL 92
Query: 355 NRIETVNVLDFLGSVYDNTIQVI 423
N ++T+NVL + ++YDN ++
Sbjct: 93 NTVKTINVLQLMSNIYDNKFVIV 115
>UniRef50_Q00732 Cluster: p48 protein; n=16;
Nucleopolyhedrovirus|Rep: p48 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 387
Score = 60.1 bits (139), Expect = 4e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 3 RHIITKYQLDNEISLLIELNHDCFNK 80
RHIITKYQLDNEISLLIELNHDCFNK
Sbjct: 362 RHIITKYQLDNEISLLIELNHDCFNK 387
>UniRef50_Q9YMM4 Cluster: LdOrf-103 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-103 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 121
Score = 50.8 bits (116), Expect = 2e-05
Identities = 26/78 (33%), Positives = 46/78 (58%)
Frame = +1
Query: 190 MLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 369
++ +N S A +L ND + NK ++ LS S A+++L +Q N+ ++L+ +
Sbjct: 45 LINALNDNMSSVALHIL-NDTSENKADTFGKLSRTSAVAKSILADIQDNQETMRLDAAKG 103
Query: 370 VNVLDFLGSVYDNTIQVI 423
V VL L ++YDNTI++I
Sbjct: 104 VAVLQLLNNIYDNTIRLI 121
>UniRef50_Q287K2 Cluster: P12; n=3; Nucleopolyhedrovirus|Rep: P12 -
Agrotis segetum nuclear polyhedrosis virus (AsNPV)
Length = 113
Score = 50.4 bits (115), Expect = 3e-05
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +1
Query: 175 MAAVDMLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKL 354
M A +L ++N T T A L++ND +K S+ ++ S A+ +L+ + E+ ++L
Sbjct: 32 MWADQLLNSLNETT--TVADLILNDTDEHKRISMGVIGQHSAIAKTILDYIDEEES-LRL 88
Query: 355 NRIETVNVLDFLGSVYDNTIQVI 423
+ T+NVL + +YDN I V+
Sbjct: 89 GTVNTINVLKLMSDIYDNKIPVV 111
>UniRef50_Q0N414 Cluster: P12; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: P12 - Clanis bilineata
nucleopolyhedrosis virus
Length = 120
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/73 (31%), Positives = 44/73 (60%)
Frame = +1
Query: 190 MLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIET 369
M+ T+N + + A+L++ND + K S ++LS S A+N+ + + + ++LN +
Sbjct: 47 MVNTLNEYTN-SLATLILNDESAKKRVSFEVLSKSSAAAKNIFKDIVDDRDAVRLNTLRA 105
Query: 370 VNVLDFLGSVYDN 408
V+VL L ++YDN
Sbjct: 106 VSVLRLLSNIYDN 118
>UniRef50_Q9J871 Cluster: ORF64; n=5; Nucleopolyhedrovirus|Rep:
ORF64 - Spodoptera exigua MNPV
Length = 388
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/35 (54%), Positives = 27/35 (77%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCD 559
MS++ L+LEI +++ KID M +AIWP+ FPLL D
Sbjct: 1 MSSVMLFLEIERIKNKIDSEMNMAIWPKFFPLLAD 35
>UniRef50_Q99GV9 Cluster: ORF93; n=3; Nucleopolyhedrovirus|Rep:
ORF93 - Helicoverpa zea SNPV
Length = 122
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 169 TQMAAVDMLQTINTTASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKI 348
+++ + +Q++N T AS ++ D TP+K L IL+ QS A+ LL+ ++ KI
Sbjct: 37 SEVPIAEFVQSLNEL--DTLASTILKDPTPHKRNVLSILAKQSAVAKRLLDVIENGNDKI 94
Query: 349 KLN-RIETVNVLDFLGSVYDN 408
KLN ++ + L ++DN
Sbjct: 95 KLNGSMQAIETLRLFSDIFDN 115
>UniRef50_Q91BD5 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 121
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Frame = +1
Query: 184 VDMLQTINTTAS-QTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNR 360
+D Q IN T+A ++ D + N+ E+L++LS QS A+ ++ + ++K N
Sbjct: 40 IDPSQIINELNDVNTSAHAVLTDRSDNRLETLQVLSNQSNIAKKIVTAANNRDDRVKFNV 99
Query: 361 IETVNVLDFLGSVYDNTIQVI 423
+ET+ +L + +YDN ++
Sbjct: 100 VETMELLRLMTDLYDNKFLIV 120
>UniRef50_Q80LL9 Cluster: Budded virus/occlusion-derived virus
structural protein; n=1; Adoxophyes honmai NPV|Rep:
Budded virus/occlusion-derived virus structural protein
- Adoxophyes honmai nucleopolyhedrovirus
Length = 364
Score = 47.2 bits (107), Expect = 3e-04
Identities = 20/33 (60%), Positives = 26/33 (78%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLL 553
MS + L+LEI KL+ KID+ MQ+ IWP+ FPLL
Sbjct: 1 MSEVMLFLEIEKLKNKIDKEMQMDIWPKFFPLL 33
>UniRef50_P24651 Cluster: p48 protein; n=7;
Nucleopolyhedrovirus|Rep: p48 protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 411
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +3
Query: 3 RHIITKYQLDNEISLLIELNHDCFNK 80
R II YQLDNEISLL++LNHDCF++
Sbjct: 385 RRIIVDYQLDNEISLLLDLNHDCFDR 410
>UniRef50_Q0IL13 Cluster: ORF106; n=2; Nucleopolyhedrovirus|Rep:
ORF106 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 382
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/35 (54%), Positives = 26/35 (74%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCD 559
MS++ L+LEI L+ KID+ M + IWP+ FPLL D
Sbjct: 1 MSSVMLFLEIENLKNKIDKRMNMGIWPKFFPLLVD 35
>UniRef50_Q80LL8 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 99
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 211 TASQTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFL 390
T T+A +ND + NK + LS +S A+ +L+ ++ +++ ++ N I TVN L L
Sbjct: 30 TEFNTSAKRFLNDTSKNKELYFRDLSKRSATAKKILKCIEDDQSAVQFNLISTVNFLKLL 89
Query: 391 GSVYDNTI 414
++DN +
Sbjct: 90 SDIHDNNV 97
>UniRef50_Q8V5R3 Cluster: ORF92; n=4; Nucleopolyhedrovirus|Rep:
ORF92 - Helicoverpa zea SNPV
Length = 369
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCD 559
MS + L+LEI ++ KID M ++IWP+ FPLL D
Sbjct: 1 MSGVMLFLEIENMKNKIDRRMNMSIWPKFFPLLVD 35
>UniRef50_A0EYY4 Cluster: P12; n=1; Ecotropis obliqua NPV|Rep: P12 -
Ecotropis obliqua NPV
Length = 140
Score = 44.8 bits (101), Expect = 0.002
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +1
Query: 178 AAVDMLQTINTTAS--QTAASLLINDITPNKTESLKILSTQSVGARNLLEPMQANETKIK 351
+A+D + IN+ S + AS +I D + K + KILS S A+ +L+ ++ ++ +
Sbjct: 60 SAIDPVTLINSLNSNNKNMASFIIADESLKKQNTFKILSKVSSSAKGVLKDIEDDKESMP 119
Query: 352 LNRIETVNVLDFLGSVYDN 408
L + NVL L ++YDN
Sbjct: 120 LTTLRATNVLRLLSNIYDN 138
>UniRef50_Q9YMM5 Cluster: LdOrf-102 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-102 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 381
Score = 39.1 bits (87), Expect = 0.075
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLLCD 559
M+A+ L+ EI LR +ID MQ+ +W ++F LLCD
Sbjct: 1 MTAVNLFNEIVNLRDRIDPQMQMDVWLRLFRLLCD 35
>UniRef50_A0EYY3 Cluster: P40; n=4; Nucleopolyhedrovirus|Rep: P40 -
Ecotropis obliqua NPV
Length = 385
Score = 37.9 bits (84), Expect = 0.17
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +2
Query: 455 MSAIALYLEINKLRLKIDEPMQLAIWPQIFPLL 553
MS+I L+ EI LR KID MQ+ IWP++F LL
Sbjct: 1 MSSIDLFNEIVILRDKIDPQMQMDIWPKLFNLL 33
>UniRef50_Q4QDY2 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 90
Score = 35.9 bits (79), Expect = 0.70
Identities = 20/46 (43%), Positives = 25/46 (54%)
Frame = +2
Query: 197 KPSTPRPLKRPRRC*STTLRPIKLKV*KFCLLNLSERAICWNRCKP 334
KPS PRP++RPRRC S + PI L CL + +R C P
Sbjct: 13 KPSPPRPVERPRRC-SRPVLPIVLLQAFDCLTSAGKREKHQRGCSP 57
>UniRef50_Q12267 Cluster: Structural maintenance of chromosomes
protein 4; n=5; Saccharomycetales|Rep: Structural
maintenance of chromosomes protein 4 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1418
Score = 33.9 bits (74), Expect = 2.8
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +1
Query: 187 DMLQTINTTASQTAASLLINDITPNKTESLKI-LSTQSVGARNLLEPMQANETKIKLNRI 363
D L+ I T +L ND N+T +LK+ L QS + +E M+ + + K I
Sbjct: 1028 DELKVIEEQLKHTKLALAENDTNMNETLNLKVELKEQSEQLKEQMEDMEESINEFKSIEI 1087
Query: 364 ETVNVLDFLGSV 399
E N L+ L S+
Sbjct: 1088 EMKNKLEKLNSL 1099
>UniRef50_Q8JG61 Cluster: Protein 4.1; n=1; Danio rerio|Rep: Protein
4.1 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 1534
Score = 33.5 bits (73), Expect = 3.7
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = +1
Query: 238 LINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQ 417
++ D+ P TE ++LS S ++ E QA E K ++ +IE V + + TIQ
Sbjct: 606 ILFDVHPQTTEISQLLSDVS---SSIPEGAQAEEVKREVEKIELVLPEKPKTLMREETIQ 662
Query: 418 VIVTE*VCVVGHDERYRVVFGNKQIAVKNRRA 513
VT H E+ V G Q A+ +RA
Sbjct: 663 SRVTTEEIQKEHQEQVTVNHGRSQTAILEQRA 694
>UniRef50_Q31FP5 Cluster: Methyl-accepting chemotaxis protein
precursor; n=1; Thiomicrospira crunogena XCL-2|Rep:
Methyl-accepting chemotaxis protein precursor -
Thiomicrospira crunogena (strain XCL-2)
Length = 330
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 265 TESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQVIVTE 432
TE KI+ ARN +E M + + +++ +++ V DFL + DN Q+ + +
Sbjct: 265 TEIQKIIEELQQRARNAVEVMGSGQERVEATQMQAGKVNDFLHEIEDNLSQLKIAQ 320
>UniRef50_A0BSA1 Cluster: Chromosome undetermined scaffold_124,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_124,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 379
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/82 (23%), Positives = 39/82 (47%)
Frame = +1
Query: 328 QANETKIKLNRIETVNVLDFLGSVYDNTIQVIVTE*VCVVGHDERYRVVFGNKQIAVKNR 507
Q E + + N+I ++ D+L Y N IV + + + + RV+ GNKQ +
Sbjct: 256 QLTEGQFERNQILSIQKQDYLYPPYSNEDIQIVDQRILIKNIHLKTRVMIGNKQQNSSEK 315
Query: 508 RAYAIGDMAPDISFALRRTSKT 573
+++ + ++ I ++ KT
Sbjct: 316 KSHKVNKISNGIQHLIQSIKKT 337
>UniRef50_Q6UPR1 Cluster: NIMA-related kinase 5; n=1; Chlamydomonas
reinhardtii|Rep: NIMA-related kinase 5 - Chlamydomonas
reinhardtii
Length = 812
Score = 32.7 bits (71), Expect = 6.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +3
Query: 93 YGHWQQHVANTKKPPQQTAGKPFGANANGGRRHVANHQHHG 215
YGH +Q A + P G P G A GG A HHG
Sbjct: 632 YGHARQSPAPDARRPAAQYGTPPGGRAGGGYGAAAGGSHHG 672
>UniRef50_Q3LS85 Cluster: 185/333; n=79; Strongylocentrotus
purpuratus|Rep: 185/333 - Strongylocentrotus purpuratus
(Purple sea urchin)
Length = 372
Score = 32.7 bits (71), Expect = 6.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Frame = +3
Query: 96 GHWQQHVANTKKPPQ-QTAGKPFG----ANANGGRRHVANHQHHG 215
GH ++H + + PPQ + +PFG N GR H +H HHG
Sbjct: 166 GHGRRHHGHRQGPPQDRPEEQPFGQRNERNEEDGRPHPHHHGHHG 210
>UniRef50_Q8NG66 Cluster: Serine/threonine-protein kinase Nek11;
n=32; Eumetazoa|Rep: Serine/threonine-protein kinase
Nek11 - Homo sapiens (Human)
Length = 645
Score = 32.7 bits (71), Expect = 6.5
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 238 LINDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLDFLGSVYDNTIQ 417
L++D + E LK+L SVG N E +QAN L++++ ++ F S +
Sbjct: 45 LVSDKKAKRGEELKVLKEISVGELNPNETVQANLEAQLLSKLDHPAIVKFHASFVEQDNF 104
Query: 418 VIVTE 432
I+TE
Sbjct: 105 CIITE 109
>UniRef50_A3IXJ5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 1249
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 238 LINDITPNKTESLKILSTQSVGAR--NLLEPMQANETKIKLNRIETVNVLDFLGSVYD 405
L++++ K S +I +Q V R N L P + N ++L +ET+ + DF+ + YD
Sbjct: 932 LLHNLDKCKERSQRIYHSQLVKGRLGNTLTPWKHNPRYLRLKVLETIGLKDFIHNHYD 989
>UniRef50_A1ZWD4 Cluster: Valyl-tRNA synthetase; n=3; cellular
organisms|Rep: Valyl-tRNA synthetase - Microscilla
marina ATCC 23134
Length = 908
Score = 32.3 bits (70), Expect = 8.6
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 436 VCVVGHDERYRVVFGNKQIA-VKNRRAYAIGDMAPDISF 549
VCV DERY+ + G K I + NR IGD D SF
Sbjct: 235 VCVNPEDERYKHLIGKKAIVPLVNREVPIIGDKYVDTSF 273
>UniRef50_A0D7G9 Cluster: Chromosome undetermined scaffold_4, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_4,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 226
Score = 32.3 bits (70), Expect = 8.6
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 241 INDITPNKTESLKILSTQSVGARNLLEPMQANETKIKLN 357
IN+ PNK+++ K ST+ + + +LE QA + IK N
Sbjct: 57 INETLPNKSKNKKSRSTEQINLKLILETWQAKQIYIKDN 95
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,886,025
Number of Sequences: 1657284
Number of extensions: 10166445
Number of successful extensions: 29206
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 27985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29158
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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