Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29d17
         (386 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK056313-1|BAB71146.1|  618|Homo sapiens protein ( Homo sapiens ...    29   4.0  
BC110387-1|AAI10388.1|  563|Homo sapiens hypothetical protein LO...    29   5.2  
BC041388-1|AAH41388.1|  618|Homo sapiens zinc finger protein 553...    29   5.2  
BC010431-1|AAH10431.1|  264|Homo sapiens HOM-TES-103 protein pro...    29   5.2  
AF260261-1|AAF70308.1|  513|Homo sapiens Abl-interactor protein ...    29   5.2  
U15687-1|AAA60984.1|   57|Homo sapiens plasma membrane calcium p...    28   9.1  
U15686-1|AAA60983.1|   62|Homo sapiens plasma membrane calcium p...    28   9.1  
S49852-1|AAB24324.1|  110|Homo sapiens plasma membrane Ca2+ pump...    28   9.1  
M25824-1|AAA58383.1|  112|Homo sapiens calcium ATPase C protein.       28   9.1  
L14561-2|AAD09925.1| 1040|Homo sapiens plasma membrane calcium A...    28   9.1  
BC049388-1|AAH49388.1|  263|Homo sapiens FAM78A protein protein.       28   9.1  
BC029924-1|AAH29924.2|  201|Homo sapiens FAM78A protein protein.       28   9.1  
AL157938-13|CAI41115.1|  283|Homo sapiens family with sequence s...    28   9.1  
AL157938-12|CAI41114.1|  252|Homo sapiens family with sequence s...    28   9.1  
AL157938-11|CAI41113.1|  280|Homo sapiens family with sequence s...    28   9.1  
AK024434-1|BAB15724.1|  195|Homo sapiens FLJ00024 protein protein.     28   9.1  
AB208896-1|BAD92133.1|  840|Homo sapiens plasma membrane calcium...    28   9.1  

>AK056313-1|BAB71146.1|  618|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31751 fis, clone NT2RI2007439, weakly similar to
           ZINC FINGER PROTEIN 84. ).
          Length = 618

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -3

Query: 318 KAGGGFVPPIGRRQRI*KPTGSSQPHIASQPDPITNVSTPDLTKMGFTHTTVNSFSSPGR 139
           + G GF     R + +   +G  +PH   + D   ++S+  L +   TH     FS PG 
Sbjct: 335 ECGKGFADSSARVKHLRTHSGE-RPHACPECDRTFSLSST-LLRHRLTHMEPQDFSFPGY 392

Query: 138 L*PSLMPSSVIP 103
             P+L+PS   P
Sbjct: 393 PLPALIPSPPPP 404


>BC110387-1|AAI10388.1|  563|Homo sapiens hypothetical protein
           LOC25900 protein.
          Length = 563

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = -3

Query: 264 PTGSSQPHIASQPDPITNVSTPDLTKMGFTHTTVNSFSSPGRL*PSLMPSSV 109
           P G   P  AS     T+ ST   +   F   T+ SFS   RL P L P+ V
Sbjct: 163 PAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLV 214


>BC041388-1|AAH41388.1|  618|Homo sapiens zinc finger protein 553
           protein.
          Length = 618

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -3

Query: 318 KAGGGFVPPIGRRQRI*KPTGSSQPHIASQPDPITNVSTPDLTKMGFTHTTVNSFSSPGR 139
           + G GF     R + +   +G  +PH   + D   ++S+  L +   TH     FS PG 
Sbjct: 335 ECGKGFADSPARVKHLHTHSGE-RPHACPECDRTFSLSST-LLRHRLTHMEPQDFSFPGY 392

Query: 138 L*PSLMPSSVIP 103
             P+L+PS   P
Sbjct: 393 PLPALIPSPPPP 404


>BC010431-1|AAH10431.1|  264|Homo sapiens HOM-TES-103 protein
           protein.
          Length = 264

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 19/52 (36%), Positives = 23/52 (44%)
 Frame = -3

Query: 264 PTGSSQPHIASQPDPITNVSTPDLTKMGFTHTTVNSFSSPGRL*PSLMPSSV 109
           P G   P  AS     T+ ST   +   F   T+ SFS   RL P L P+ V
Sbjct: 163 PAGPLAPSAASLSSSSTSTSTTYSSSARFMPGTIWSFSHARRLGPGLEPTLV 214


>AF260261-1|AAF70308.1|  513|Homo sapiens Abl-interactor protein 2b
           protein.
          Length = 513

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
 Frame = -3

Query: 342 RRRTTNSSKAGGGFVPPIGRRQRI*KPTGS-SQPHIASQPDPITNVSTPDLTKMGFTHTT 166
           R RT +SS + GG  P      R    +GS   P     P P +    P     G     
Sbjct: 237 RNRTYSSSGSSGGSHPSSRSSSRENSGSGSVGVPIAVPTPSPPSVFPAP-AGSAGTPPLP 295

Query: 165 VNSFSSPGRL*PSLMPSSVIP 103
             S S+P  L P+ +PSS  P
Sbjct: 296 ATSASAPAPLVPATVPSSTAP 316


>U15687-1|AAA60984.1|   57|Homo sapiens plasma membrane calcium pump
           protein.
          Length = 57

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249 QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
           QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 23  QPSIASQHHDVTNISTP--THVVFSSSTAST 51


>U15686-1|AAA60983.1|   62|Homo sapiens plasma membrane calcium pump
           protein.
          Length = 62

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249 QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
           QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 23  QPSIASQHHDVTNISTP--THVVFSSSTAST 51


>S49852-1|AAB24324.1|  110|Homo sapiens plasma membrane Ca2+ pump
           isoform 1a protein.
          Length = 110

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249 QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
           QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 71  QPSIASQHHDVTNISTP--THVVFSSSTAST 99


>M25824-1|AAA58383.1|  112|Homo sapiens calcium ATPase C protein.
          Length = 112

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249 QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
           QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 81  QPSIASQHHDVTNISTP--THVVFSSSTAST 109


>L14561-2|AAD09925.1| 1040|Homo sapiens plasma membrane calcium ATPase
            isoform 1 protein.
          Length = 1040

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249  QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
            QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 1001 QPSIASQHHDVTNISTP--THVVFSSSTAST 1029


>BC049388-1|AAH49388.1|  263|Homo sapiens FAM78A protein protein.
          Length = 263

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 204 PLGQRARLREPIAQDQPKILSKNEPI 229


>BC029924-1|AAH29924.2|  201|Homo sapiens FAM78A protein protein.
          Length = 201

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 142 PLGQRARLREPIAQDQPKILSKNEPI 167


>AL157938-13|CAI41115.1|  283|Homo sapiens family with sequence
           similarity 78, member A protein.
          Length = 283

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 224 PLGQRARLREPIAQDQPKILSKNEPI 249


>AL157938-12|CAI41114.1|  252|Homo sapiens family with sequence
           similarity 78, member A protein.
          Length = 252

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 193 PLGQRARLREPIAQDQPKILSKNEPI 218


>AL157938-11|CAI41113.1|  280|Homo sapiens family with sequence
           similarity 78, member A protein.
          Length = 280

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 221 PLGQRARLREPIAQDQPKILSKNEPI 246


>AK024434-1|BAB15724.1|  195|Homo sapiens FLJ00024 protein protein.
          Length = 195

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 294 PIGRRQRI*KPTGSSQPHIASQPDPI 217
           P+G+R R+ +P    QP I S+ +PI
Sbjct: 136 PLGQRARLREPIAQDQPKILSKNEPI 161


>AB208896-1|BAD92133.1|  840|Homo sapiens plasma membrane calcium
           ATPase 1 isoform 1a variant protein.
          Length = 840

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = -3

Query: 249 QPHIASQPDPITNVSTPDLTKMGFTHTTVNS 157
           QP IASQ   +TN+STP  T + F+ +T ++
Sbjct: 801 QPSIASQHHDVTNISTP--THVVFSSSTAST 829


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,807,437
Number of Sequences: 237096
Number of extensions: 1010337
Number of successful extensions: 1936
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)