Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29d09
(431 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41658 Cluster: Late expression factor 5; n=13; Nucleop... 127 1e-28
UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2; ... 120 1e-26
UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Le... 70 2e-11
UniRef50_O10344 Cluster: Late expression factor 5; n=8; Nucleopo... 65 7e-10
UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep: L... 60 1e-08
UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;... 55 7e-07
UniRef50_P24649 Cluster: DNA-binding protein; n=6; Nucleopolyhed... 41 0.013
UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R... 35 0.64
UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases... 34 1.1
UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2; Pla... 34 1.1
UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei... 33 2.6
UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas... 33 3.4
UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2; ... 32 4.5
UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1; Helio... 32 5.9
UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3; ... 32 5.9
UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3; D... 32 5.9
>UniRef50_P41658 Cluster: Late expression factor 5; n=13;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 265
Score = 127 bits (306), Expect = 1e-28
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = -3
Query: 423 LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGMSGC 247
LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASF+RYCR+CGMSGC
Sbjct: 207 LNDKVIYLQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFIRYCRLCGMSGC 265
>UniRef50_Q0GYC3 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Plutella xylostella multiple
nucleopolyhedrovirus
Length = 74
Score = 120 bits (290), Expect = 1e-26
Identities = 53/69 (76%), Positives = 55/69 (79%)
Frame = -1
Query: 209 MNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKNGAGVSNHMWHRLKNDDGDDKPCLNCVIY 30
MNGSWIFCMC VYPGGVCNPSFC CV SNHMW+RLKN DGDDKPCLNCVIY
Sbjct: 1 MNGSWIFCMCGVYPGGVCNPSFCACV----------SNHMWYRLKNGDGDDKPCLNCVIY 50
Query: 29 VAVVFTFLI 3
VAV+FT LI
Sbjct: 51 VAVIFTLLI 59
>UniRef50_Q77K58 Cluster: Lef5; n=4; Nucleopolyhedrovirus|Rep: Lef5
- Helicoverpa armigera NPV
Length = 315
Score = 70.1 bits (164), Expect = 2e-11
Identities = 27/47 (57%), Positives = 40/47 (85%)
Frame = -3
Query: 402 LQNSNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMC 262
+ +S K KL+ ++G+SL++C+H FVTVE QTRAGDEI SF++YC++C
Sbjct: 260 INSSLKYKLYSINGMSLRACQHSFVTVEKQTRAGDEIVSFIKYCQIC 306
>UniRef50_O10344 Cluster: Late expression factor 5; n=8;
Nucleopolyhedrovirus|Rep: Late expression factor 5 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 263
Score = 64.9 bits (151), Expect = 7e-10
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Frame = -3
Query: 423 LNDKVIYLQNSN-----KNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCG 259
L+D+VIYL N N + L SG SL C H + TVE QTRAGDE+ SF+RYC +C
Sbjct: 201 LSDRVIYLHNKNDVLDERTLLHGPSGTSLAPCLHRYATVERQTRAGDEMVSFIRYCELCQ 260
Query: 258 M 256
M
Sbjct: 261 M 261
>UniRef50_Q0IL15 Cluster: Lef-5; n=5; Nucleopolyhedrovirus|Rep:
Lef-5 - Leucania separata nuclear polyhedrosis virus
(LsNPV)
Length = 302
Score = 60.5 bits (140), Expect = 1e-08
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -3
Query: 393 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCGM 256
++ ++L +SG+SL C+H+FV VE Q RAGDE SF+R+C+ CG+
Sbjct: 251 ADADRLHPMSGMSLNLCKHEFVVVERQLRAGDEAVSFIRHCKRCGL 296
>UniRef50_P41727 Cluster: Late expression factor 5 homolog; n=10;
Granulovirus|Rep: Late expression factor 5 homolog -
Cryptophlebia leucotreta granulosis virus (ClGV)
(Cryptophlebialeucotreta granulovirus)
Length = 240
Score = 54.8 bits (126), Expect = 7e-07
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = -3
Query: 393 SNKNKLFELSGLSLKSCRHDFVTVESQTRAGDEIASFLRYCRMCG 259
S+++ L L+G ++ SC HD+V E Q RAGDE+ SF+++C+ CG
Sbjct: 194 SSQSSLSNLNGYTIASCVHDYVIEEHQLRAGDEMVSFIKFCKKCG 238
>UniRef50_P24649 Cluster: DNA-binding protein; n=6;
Nucleopolyhedrovirus|Rep: DNA-binding protein - Bombyx
mori nuclear polyhedrosis virus (BmNPV)
Length = 65
Score = 40.7 bits (91), Expect = 0.013
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2
Query: 50 MVYRRRRRSSTGATYGLT 103
MVYRRRRRSSTGATYGLT
Sbjct: 1 MVYRRRRRSSTGATYGLT 18
>UniRef50_UPI0000F1D641 Cluster: PREDICTED: similar to tenascin-R;
n=1; Danio rerio|Rep: PREDICTED: similar to tenascin-R -
Danio rerio
Length = 618
Score = 35.1 bits (77), Expect = 0.64
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = -1
Query: 248 VNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVC 135
VN S C G L + S IFC GVC FCVC
Sbjct: 272 VNGSCQCRSGFLGEDCSLIFCANNCSQRGVCKEGFCVC 309
>UniRef50_UPI000050FD95 Cluster: COG0491: Zn-dependent hydrolases,
including glyoxylases; n=1; Brevibacterium linens
BL2|Rep: COG0491: Zn-dependent hydrolases, including
glyoxylases - Brevibacterium linens BL2
Length = 255
Score = 34.3 bits (75), Expect = 1.1
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 63 AVVVLQPVPHMV*HAGAVLQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHAT 242
+ VV+ P P M H A L V+ D A V D H+E G++ A EV +A
Sbjct: 28 SAVVIDPGPEMADHCQAFLAEVADRDLTAIVLTHQHAD--HSEMLGSIEQWAPEVPVYAV 85
Query: 243 INSQTFHTSDSSEG 284
+ HT ++G
Sbjct: 86 LERFARHTEPVADG 99
>UniRef50_Q7RCT6 Cluster: Putative transcription factor; n=2;
Plasmodium (Vinckeia)|Rep: Putative transcription factor
- Plasmodium yoelii yoelii
Length = 383
Score = 34.3 bits (75), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 417 DKVIYLQNSNKNKLFELSGLSLKSCRHDFVT-VESQTRAGDEIASFLRYCRMC 262
DK + L +N + ++ C HDF+ V QTR+ DE ++ + YC C
Sbjct: 323 DKNVELFKEGENGAYNITYEKCTDCDHDFLYFVNIQTRSADEGSTIIYYCPNC 375
>UniRef50_Q38X97 Cluster: DNA primase G; n=1; Lactobacillus sakei
subsp. sakei 23K|Rep: DNA primase G - Lactobacillus
sakei subsp. sakei (strain 23K)
Length = 627
Score = 33.1 bits (72), Expect = 2.6
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +3
Query: 117 LQPVSHADAEARVTDAARVDLAHTEDPGAVH*QAAEVTEHATINSQ 254
L+ +S +A +V D A V LA + P AVH +++EVT+ + Q
Sbjct: 77 LEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLYQQ 122
>UniRef50_Q15ZB0 Cluster: NUDIX hydrolase; n=1; Pseudoalteromonas
atlantica T6c|Rep: NUDIX hydrolase - Pseudoalteromonas
atlantica (strain T6c / BAA-1087)
Length = 271
Score = 32.7 bits (71), Expect = 3.4
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = -3
Query: 420 NDKVIYLQNSNKNKLFELSGLSLKSCR----HDFVTVESQTRAGDEIASFLRYCRMCGMS 253
N +V YL + N+L E +GL L R HD + + S ++A FLR R CG
Sbjct: 58 NGQVCYLVDMG-NELIEQAGLQLSHLRSLLLHDEMDIFSVAARAWQVALFLRTHRFCGQC 116
Query: 252 G 250
G
Sbjct: 117 G 117
>UniRef50_Q73T79 Cluster: Putative uncharacterized protein; n=2;
Mycobacterium avium|Rep: Putative uncharacterized
protein - Mycobacterium paratuberculosis
Length = 201
Score = 32.3 bits (70), Expect = 4.5
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 141 AEARVTDAARV--DLAHTEDPGAVH*QAAEVTEH-ATINSQTFHTSDSSEG 284
A TD AR+ D TEDPGA AA+VT H A + + +D S+G
Sbjct: 37 AATLTTDEARLLDDAGFTEDPGAYAEIAADVTAHMARLYGTAYSAADVSKG 87
>UniRef50_Q8JKL2 Cluster: Copine-like protein T2I1.10; n=1;
Heliothis zea virus 1|Rep: Copine-like protein T2I1.10 -
Heliothis zea virus 1
Length = 241
Score = 31.9 bits (69), Expect = 5.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 345 CRHDFVTVESQTRAGDEIASFLRYCRMC 262
C H F T+E QTR+GDE + C C
Sbjct: 165 CDHVFKTIEQQTRSGDEEITVSNICIKC 192
>UniRef50_A5FRF5 Cluster: Putative uncharacterized protein; n=3;
Dehalococcoides|Rep: Putative uncharacterized protein -
Dehalococcoides sp. BAV1
Length = 193
Score = 31.9 bits (69), Expect = 5.9
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = -1
Query: 293 SLRSFATVGCVECLAVNSSVFCNFGGLSMNGSWIFCMCEVYPGGVCNPSFCVCV*YRLKN 114
+L +F + VE +AV ++ C GL + + C Y +CN C CV YRLK+
Sbjct: 101 TLENFKPISRVEAMAVITT--CQQAGLMT--TLVHCKEHFY--SICNCCRCCCVPYRLKH 154
Query: 113 GAGV 102
G+
Sbjct: 155 QYGI 158
>UniRef50_P84180 Cluster: Putative gustatory receptor 22b; n=3;
Drosophila melanogaster|Rep: Putative gustatory receptor
22b - Drosophila melanogaster (Fruit fly)
Length = 386
Score = 31.9 bits (69), Expect = 5.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 289 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 200
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,985,596
Number of Sequences: 1657284
Number of extensions: 7151197
Number of successful extensions: 19586
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19583
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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