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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29c10
         (671 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P12826 Cluster: Early 18.5 kDa protein; n=13; Nucleopol...   252   4e-66
UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5; Nucleopoly...   169   7e-41
UniRef50_Q2NP63 Cluster: ORF135 peptide; n=2; Nucleopolyhedrovir...   132   6e-30
UniRef50_Q9Q3Y0 Cluster: AcORF17 homolog; n=1; Amsacta albistrig...   109   8e-23
UniRef50_O10276 Cluster: Putative early 21.8 kDa protein; n=8; N...    54   4e-06
UniRef50_Q77SB2 Cluster: Putative uncharacterized protein; n=1; ...    48   2e-04
UniRef50_Q80LH6 Cluster: Putative uncharacterized protein; n=1; ...    46   0.001
UniRef50_Q0IKX7 Cluster: ORF142; n=1; Leucania separata nuclear ...    43   0.008
UniRef50_Q8JMB6 Cluster: Putative uncharacterized protein; n=2; ...    41   0.031
UniRef50_Q6X857 Cluster: ORF-B; n=2; Spodoptera frugiperda MNPV|...    38   0.17 
UniRef50_Q0N3X6 Cluster: Se29-like protein; n=1; Clanis bilineat...    38   0.29 
UniRef50_Q287P2 Cluster: ORF-30; n=1; Agrotis segetum nucleopoly...    36   0.89 
UniRef50_Q0W463 Cluster: Putative uncharacterized protein; n=1; ...    36   0.89 
UniRef50_A7EID6 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa...    35   2.1  
UniRef50_UPI00006CE926 Cluster: hypothetical protein TTHERM_0056...    33   6.3  
UniRef50_Q6DBR5 Cluster: Zgc:91929; n=3; Clupeocephala|Rep: Zgc:...    33   6.3  
UniRef50_A3SKG7 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q3WJ87 Cluster: Luciferase; n=1; Frankia sp. EAN1pec|Re...    33   8.3  
UniRef50_Q2HQT3 Cluster: DeoR-like protein; n=1; Cystobacter fus...    33   8.3  
UniRef50_A2F0W3 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_Q1DYZ9 Cluster: Predicted protein; n=1; Coccidioides im...    33   8.3  

>UniRef50_P12826 Cluster: Early 18.5 kDa protein; n=13;
           Nucleopolyhedrovirus|Rep: Early 18.5 kDa protein -
           Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 164

 Score =  252 bits (618), Expect = 4e-66
 Identities = 120/134 (89%), Positives = 125/134 (93%)
 Frame = +1

Query: 220 MNLKVILTPINLKGEGEPNCVERITIMPCSLMDTEICLNVRCRSPFAKFKVLIIVDGFDS 399
           MNLKVILTPINLKGE EPNCVERITIMPC L+DTEICLNVRCRSPFAKFKVLIIVDGFDS
Sbjct: 1   MNLKVILTPINLKGEEEPNCVERITIMPCILIDTEICLNVRCRSPFAKFKVLIIVDGFDS 60

Query: 400 AYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVK 579
           AYIQATFCSISDSVTIVNK NEKHV FDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVK
Sbjct: 61  AYIQATFCSISDSVTIVNKSNEKHVTFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVK 120

Query: 580 DMVNSIEKPTDNVK 621
           D+V+SI+     +K
Sbjct: 121 DVVDSIQNQQTMLK 134



 Score = 40.7 bits (91), Expect = 0.031
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +2

Query: 596 LKNQQTMLKVFINEANVYNQ 655
           ++NQQTMLKVFINEANVYN+
Sbjct: 126 IQNQQTMLKVFINEANVYNK 145


>UniRef50_P12827 Cluster: Early 25.9 kDa protein; n=5;
           Nucleopolyhedrovirus|Rep: Early 25.9 kDa protein -
           Autographa californica nuclear polyhedrosis virus
           (AcMNPV)
          Length = 225

 Score =  169 bits (410), Expect = 7e-41
 Identities = 81/82 (98%), Positives = 81/82 (98%)
 Frame = +3

Query: 3   RRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFGPRVIVYENSRRFEFINPDEI 182
           RRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFG RVIVYENSRRFEFINPDEI
Sbjct: 144 RRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFGSRVIVYENSRRFEFINPDEI 203

Query: 183 ASGKRLIIKHLQDESQSDINAY 248
           ASGKRLIIKHLQDESQSDINAY
Sbjct: 204 ASGKRLIIKHLQDESQSDINAY 225


>UniRef50_Q2NP63 Cluster: ORF135 peptide; n=2;
           Nucleopolyhedrovirus|Rep: ORF135 peptide - Hyphantria
           cunea nuclear polyhedrosis virus (HcNPV)
          Length = 209

 Score =  132 bits (320), Expect = 6e-30
 Identities = 64/134 (47%), Positives = 91/134 (67%)
 Frame = +1

Query: 220 MNLKVILTPINLKGEGEPNCVERITIMPCSLMDTEICLNVRCRSPFAKFKVLIIVDGFDS 399
           M++ V L PINLKG  EP   ER ++ P    D E CL V+CRSPFAKFKVLI +  F  
Sbjct: 1   MDITVTLVPINLKGVEEPKRSERFSLTPVCA-DAEFCLTVKCRSPFAKFKVLISITNFAE 59

Query: 400 AYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVADRKVK 579
            ++QAT CS  D+V +VN  +++ ++FDGF +PDDEG T+P+++GPL++V  A   R+V+
Sbjct: 60  KHLQATVCSRYDAVCVVNTPDQREIVFDGFAKPDDEGVTVPFLVGPLFAVRHA-GRRQVR 118

Query: 580 DMVNSIEKPTDNVK 621
             VN+IE+    +K
Sbjct: 119 LAVNAIERQETMLK 132


>UniRef50_Q9Q3Y0 Cluster: AcORF17 homolog; n=1; Amsacta albistriga
           nucleopolyhedrovirus|Rep: AcORF17 homolog - Amsacta
           albistriga nucleopolyhedrovirus
          Length = 267

 Score =  109 bits (261), Expect = 8e-23
 Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 6/111 (5%)
 Frame = +1

Query: 307 SLMDTEICLNVRCRSPFAKFKVLIIVDGFDSAYIQATFCSISDSVTIVN-KFNEKHVMFD 483
           SL   EICLNV+C SPF KFK+ I++D FD   +QATFC+ +D+V IVN   +++++ FD
Sbjct: 41  SLSSREICLNVKCPSPFVKFKMSILIDQFDEDCVQATFCNGNDTVAIVNCDKHQRYIYFD 100

Query: 484 GFVRPDDEGTTMPYVIGPLYSVDAA-----VADRKVKDMVNSIEKPTDNVK 621
           GF++ DDEG T+P+V+GPLYS++         +RKV D+V  IE     +K
Sbjct: 101 GFIKMDDEGATVPFVVGPLYSINIENNNNNNGNRKVCDIVKLIESQQTPLK 151


>UniRef50_O10276 Cluster: Putative early 21.8 kDa protein; n=8;
           Nucleopolyhedrovirus|Rep: Putative early 21.8 kDa
           protein - Orgyia pseudotsugata multicapsid polyhedrosis
           virus (OpMNPV)
          Length = 197

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 28/78 (35%), Positives = 43/78 (55%)
 Frame = +3

Query: 3   RRRLAELCTLYNAEYVFCQARADGDKDRQALASLLTAAFGPRVIVYENSRRFEFINPDEI 182
           R+R+ ELC     E VFC  RAD  +DR+ +A  L  A G  V+    ++RFE  + +++
Sbjct: 117 RQRVLELCA-NGGEQVFCARRADCARDRRRVAEALATALGAGVVASAANKRFEIEDEEKL 175

Query: 183 ASGKRLIIKHLQDESQSD 236
            S K ++ + L D   SD
Sbjct: 176 VSAKLIVQQVLHDGDHSD 193


>UniRef50_Q77SB2 Cluster: Putative uncharacterized protein; n=1;
           Ecotropis obliqua NPV|Rep: Putative uncharacterized
           protein - Ecotropis obliqua NPV
          Length = 251

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
 Frame = +1

Query: 394 DSAYIQATFCSISDSVTIVNKFNEKH-VMFDGFVRPDDEGTTMPYVIGPLYSV-DAAVAD 567
           ++ YIQATF      V IVN  N     +FDGF+   DE  T+P+ + PL  + + A+  
Sbjct: 62  NNKYIQATFACPPKHVCIVNALNSNMPCVFDGFIDETDETKTVPFCVTPLNEIRNDAIGL 121

Query: 568 RKVKDMVNSIEK 603
            KV++M  ++E+
Sbjct: 122 LKVREMAKAMER 133


>UniRef50_Q80LH6 Cluster: Putative uncharacterized protein; n=1;
           Adoxophyes honmai NPV|Rep: Putative uncharacterized
           protein - Adoxophyes honmai nucleopolyhedrovirus
          Length = 220

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
 Frame = +1

Query: 367 KVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKH--VMFDGFVRPDDEGTTMPYV 528
           K+ I +D  D  Y+QATF  +   V+IVN    KH  ++FDGF  P+DE  T P++
Sbjct: 47  KLKIEIDSIDK-YVQATFQYLEKYVSIVNA-RAKHDKIVFDGFANPEDEAKTCPFI 100


>UniRef50_Q0IKX7 Cluster: ORF142; n=1; Leucania separata nuclear
           polyhedrosis virus|Rep: ORF142 - Leucania separata
           nuclear polyhedrosis virus (LsNPV)
          Length = 250

 Score = 42.7 bits (96), Expect = 0.008
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = +1

Query: 370 VLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKH-VMFDGFVRPDDEGTTMPYVIGPLYS 546
           V + VD  D+ YIQ TF   S  +T+VN  N++  ++FDGF+   D+  T P+V+  +Y 
Sbjct: 50  VSVTVDS-DNRYIQGTFKCKSKHLTVVNVKNKRDPLIFDGFMDELDDAKTKPFVVYHMYG 108

Query: 547 V--DAAVADRKVKDMVNSIEKPT 609
           +  D  +  R++   + +  K T
Sbjct: 109 LRDDHRLNSRQMAQAMGNAPKLT 131


>UniRef50_Q8JMB6 Cluster: Putative uncharacterized protein; n=2;
           Nucleopolyhedrovirus|Rep: Putative uncharacterized
           protein - Mamestra configurata NPV-B
          Length = 213

 Score = 40.7 bits (91), Expect = 0.031
 Identities = 28/87 (32%), Positives = 47/87 (54%)
 Frame = +1

Query: 349 SPFAKFKVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYV 528
           +P A+ KV +  D  +S  +QA F    +S+ IVN   ++ V+FDGFV  +DE  T  ++
Sbjct: 42  TPAARLKVKL--DTNNSTRLQAVFKCRQESMCIVNT-PKQPVIFDGFVDIEDESRTNAFL 98

Query: 529 IGPLYSVDAAVADRKVKDMVNSIEKPT 609
           I    +        +V++M  ++E PT
Sbjct: 99  IKNNLNALKPDHGLRVREMARAMESPT 125


>UniRef50_Q6X857 Cluster: ORF-B; n=2; Spodoptera frugiperda
           MNPV|Rep: ORF-B - Spodoptera frugiperda nuclear
           polyhedrosis virus (SfNPV)
          Length = 216

 Score = 38.3 bits (85), Expect = 0.17
 Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
 Frame = +1

Query: 403 YIQATFCSISDSVTIVNKFNEKHVMFDGFVRP-DDEGTTMPYVIGPLYSVDAAVADRKVK 579
           ++QA F   +  + IVN+  +K ++FDGFV   +DE  T  + +G L  ++  +    V+
Sbjct: 65  FLQALFQCGNKYMCIVNRSRDKPILFDGFVNEFEDECKTKSFNVGNLKELN-ELHGLCVR 123

Query: 580 DMVNSIEKPT 609
           +M  ++E PT
Sbjct: 124 EMARAMESPT 133


>UniRef50_Q0N3X6 Cluster: Se29-like protein; n=1; Clanis bilineata
           nucleopolyhedrosis virus|Rep: Se29-like protein - Clanis
           bilineata nucleopolyhedrosis virus
          Length = 243

 Score = 37.5 bits (83), Expect = 0.29
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = +1

Query: 367 KVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKH-VMFDGFVRPDDEGTTMPY 525
           KV I+V+     ++QATF     +V+++N  ++   ++FDGF+  +DE  T+P+
Sbjct: 52  KVRIVVES-QQKFVQATFQHGHSNVSLINALDKNFPIIFDGFMCENDESLTVPF 104


>UniRef50_Q287P2 Cluster: ORF-30; n=1; Agrotis segetum
           nucleopolyhedrovirus|Rep: ORF-30 - Agrotis segetum
           nuclear polyhedrosis virus (AsNPV)
          Length = 214

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +1

Query: 394 DSAYIQATFCSISDSVTIVNKFNEKHVM-FDGFVRPDDEGTTMPYVIGPLYSVDAAVADR 570
           D+ ++Q  F   +  + +VN  +++  + FDGF   +DEG T  + +G L  +      R
Sbjct: 50  DNRHLQVVFQCGTRRMCVVNARDKRQALVFDGFPDTEDEGRTTTFAVGTLKELRDNHGLR 109

Query: 571 KVKDMVNSIEKPT 609
            V++M   +E PT
Sbjct: 110 -VREMARVMESPT 121


>UniRef50_Q0W463 Cluster: Putative uncharacterized protein; n=1;
           uncultured methanogenic archaeon RC-I|Rep: Putative
           uncharacterized protein - Uncultured methanogenic
           archaeon RC-I
          Length = 139

 Score = 35.9 bits (79), Expect = 0.89
 Identities = 25/84 (29%), Positives = 38/84 (45%)
 Frame = -3

Query: 666 AYSIWLYTLASLINTFNIVCWFFN*IYHVLHFTIGDSSVDRI*WSDDVRHCCTFIVRPYK 487
           A  + + +  S ++T NI  W  N  Y  ++F  GD     + W D   H C++   P +
Sbjct: 24  ASDVGILSAQSRLDTDNIAKWTSNSSYQEVNFNSGD----HLNWYDFKHHYCSYA--PSQ 77

Query: 486 PVKHYMFFVKFVNNCYTIANATKG 415
            VK Y   +K+  N YT    T G
Sbjct: 78  NVKSY---IKYSGNTYTATEYTLG 98


>UniRef50_A7EID6 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 338

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
 Frame = -1

Query: 578 FTLRSATAASTEYNGPMT*GIVV--PSSSGLTNPSNITCFSLNLLTIVTLSLMLQKVA*I 405
           FTL+S +++ TE + P    I +  PS+     PSNI+  SL L+T+ +  L    V   
Sbjct: 126 FTLKSISSSETESDSPSDYLIRLNTPSTPTTITPSNISMASLELITMSSADLP-DFVVYE 184

Query: 404 *ALSNPSTIINT--LNLANGERHLTFKQISVS 315
            + SN   I+ +  +  A G+ HL+F  I +S
Sbjct: 185 TSYSNYPLILASGGIRKAGGQSHLSFTSIFIS 216


>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
           MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
           multicapsid nuclear polyhedrosis virus (LdMNPV)
          Length = 226

 Score = 34.7 bits (76), Expect = 2.1
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +1

Query: 340 RCRSPFAKFKVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKHVM-FDGFVRPDDEGTT 516
           R RS   K +V ++     +  IQA F      + +VN  + +  + FDGF   DDE  T
Sbjct: 42  RDRSAAVKVRVQVL-PVLSAGPIQAAFVQNDKHIILVNAKDARDSLEFDGFPSEDDESQT 100

Query: 517 MPYVIGPLYS 546
            P+V+  L S
Sbjct: 101 TPFVLALLKS 110


>UniRef50_UPI00006CE926 Cluster: hypothetical protein
           TTHERM_00560070; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00560070 - Tetrahymena
           thermophila SB210
          Length = 3604

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 31/118 (26%), Positives = 58/118 (49%)
 Frame = -1

Query: 518 IVVPSSSGLTNPSNITCFSLNLLTIVTLSLMLQKVA*I*ALSNPSTIINTLNLANGERHL 339
           +V PS+ G+    NI C  + L+T + L+L++  +       NP   ++++N     R+ 
Sbjct: 184 MVNPSNQGMIFYFNIVCSIILLMTTIILNLIVVLI-----YHNPE--LSSVNQLK-SRYS 235

Query: 338 TFKQISVSIKLHGIMVMRSTQLGSPSPFKLIGVNITLRFILQMFNY*TFAASNLVRIY 165
            FKQI   +++ G++++  T LGSP      G    L  +++ F +      N+  IY
Sbjct: 236 QFKQIEPLLEI-GLVLL--TYLGSPIIIYSFGQMFGLFLLVEYFYHFPLMDKNISDIY 290


>UniRef50_Q6DBR5 Cluster: Zgc:91929; n=3; Clupeocephala|Rep:
           Zgc:91929 - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 333

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 20/51 (39%), Positives = 27/51 (52%)
 Frame = +3

Query: 81  DRQALASLLTAAFGPRVIVYENSRRFEFINPDEIASGKRLIIKHLQDESQS 233
           D+  LA L    F P V++ ENSR    +  + +AS   L+I  LQ E QS
Sbjct: 75  DKSLLAQLRNGDFSPVVVLDENSRSVRDLKSESLAS---LLISALQSEVQS 122


>UniRef50_A3SKG7 Cluster: Putative uncharacterized protein; n=1;
           Roseovarius nubinhibens ISM|Rep: Putative
           uncharacterized protein - Roseovarius nubinhibens ISM
          Length = 446

 Score = 33.1 bits (72), Expect = 6.3
 Identities = 26/81 (32%), Positives = 34/81 (41%)
 Frame = +1

Query: 385 DGFDSAYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVIGPLYSVDAAVA 564
           DGFD       +CS SD    + K   KH+  DG    + + +     I  LY++     
Sbjct: 225 DGFDFDLGGRFYCSSSDDWMEMPKEERKHITIDGEATTEIDVSASHLFI--LYAIHGERL 282

Query: 565 DRKVKDMVNSIEKPTDNVKSI 627
           D  V D  N  E P D VK I
Sbjct: 283 D-YVSDPYNVAEYPRDVVKQI 302


>UniRef50_Q3WJ87 Cluster: Luciferase; n=1; Frankia sp. EAN1pec|Rep:
           Luciferase - Frankia sp. EAN1pec
          Length = 454

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 45  YVFCQARADGDKDRQALASLLTAAFG 122
           YV+C  R DGD+ R  +AS L  A+G
Sbjct: 356 YVYCSIRPDGDRARDDVASFLGGAYG 381


>UniRef50_Q2HQT3 Cluster: DeoR-like protein; n=1; Cystobacter
           fuscus|Rep: DeoR-like protein - Cystobacter fuscus
          Length = 251

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +1

Query: 508 GTTMPYVIGPLYSVDAAVADRKVKDMV 588
           GTT PY+IGPL  VD  V D    D V
Sbjct: 211 GTTSPYLIGPLSVVDRLVTDSAAPDAV 237


>UniRef50_A2F0W3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 844

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 22/93 (23%), Positives = 41/93 (44%)
 Frame = +1

Query: 352 PFAKFKVLIIVDGFDSAYIQATFCSISDSVTIVNKFNEKHVMFDGFVRPDDEGTTMPYVI 531
           PFA F    + +G   AY+Q+   ++S +VTIV+  +    + + F +  +     PY  
Sbjct: 201 PFASFVTSYLFNGCSLAYLQS---ALSQTVTIVHSLSSLRELHNNFTQVPNSDIIAPY-- 255

Query: 532 GPLYSVDAAVADRKVKDMVNSIEKPTDNVKSIY 630
              ++     A      +VNSIE     +  ++
Sbjct: 256 -KYWTTICKHAKYTFNSLVNSIELLPSGISKLF 287


>UniRef50_Q1DYZ9 Cluster: Predicted protein; n=1; Coccidioides
           immitis|Rep: Predicted protein - Coccidioides immitis
          Length = 350

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 277 CVERITIMPCSLMDTEICLNVRCRSP 354
           C+  + ++PC+ +  EIC  + CRSP
Sbjct: 8   CLAVLAVVPCATIAAEICAGITCRSP 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,730,655
Number of Sequences: 1657284
Number of extensions: 12211004
Number of successful extensions: 29127
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 28346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29121
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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