Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29c09
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    25   0.45 
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.45 
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    25   0.45 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.45 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   7.4  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.4  

>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 TEKEEIMGLLIGEVHDNGALVSIVSSV 297
           T  + ++   +G+ H NGA VS  SSV
Sbjct: 62  TPADSMVNYTLGQHHHNGAAVSAASSV 88


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 TEKEEIMGLLIGEVHDNGALVSIVSSV 297
           T  + ++   +G+ H NGA VS  SSV
Sbjct: 121 TPADSMVNYTLGQHHHNGAAVSAASSV 147


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 TEKEEIMGLLIGEVHDNGALVSIVSSV 297
           T  + ++   +G+ H NGA VS  SSV
Sbjct: 62  TPADSMVNYTLGQHHHNGAAVSAASSV 88


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 217 TEKEEIMGLLIGEVHDNGALVSIVSSV 297
           T  + ++   +G+ H NGA VS  SSV
Sbjct: 121 TPADSMVNYTLGQHHHNGAAVSAASSV 147


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 257 TSPISKPMISSFSVDNACCIQ 195
           T P S   I+   VDN CCI+
Sbjct: 540 TLPASAVGIAWLYVDNDCCIR 560


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 424 YHSHPHITVWPSHVD 468
           +H+  +I  WP H D
Sbjct: 510 FHTQSNICDWPEHAD 524


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 434 CEWYHPTTLRG 402
           C WY P +LRG
Sbjct: 460 CFWYVPKSLRG 470


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 216 RQRMLHTDQSNIRR*TDLL*HFKIYICNCYAVKRYTF 106
           ++R+ + D+S I R   +      +I N Y +  Y F
Sbjct: 38  KRRIFYQDESPISRLVYIGTDLSYFISNVYQILAYNF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,685
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)