Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29c09
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    25   1.8  
AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione S-tran...    24   4.1  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   9.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.4  

>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 395 TSAANSSALTVA*TSCSSDISTRSGFLSKRRS 300
           T     S LT+A  SC S +++  GF+   RS
Sbjct: 150 TDYVAGSRLTIADLSCISSVASMVGFIPMERS 181


>AF316635-1|AAG45163.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 377 SALTVA*TSCSSDISTRSGFLSKRRS 300
           S +T+A  SC S +++  GF+   RS
Sbjct: 156 SRMTIADLSCISSVASMVGFIPMERS 181


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -1

Query: 350 CSSDISTRSGFLSKRRSITDDTIE 279
           C S ISTR      RRS+T + +E
Sbjct: 27  CRSLISTRQHGFFPRRSVTTNLVE 50


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +1

Query: 280  SIVSSVILRRLDKKPD-RVEISEEQLVQATVRAEELAAEVGQP 405
            S+  S  +R   +  D  + +  E ++QA+ R  ELA + G+P
Sbjct: 2522 SVDDSETIREYRRPRDVLLSVVGEFIIQASTRLAELARKQGEP 2564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,406
Number of Sequences: 2352
Number of extensions: 11178
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)