Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29c05
(684 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 25 2.9
AY146757-1|AAO12072.1| 246|Anopheles gambiae odorant-binding pr... 24 5.1
AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding pr... 24 5.1
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 6.8
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.8
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.8
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 6.8
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.8
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 23 6.8
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 23 9.0
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 23 9.0
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 24.6 bits (51), Expect = 2.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 444 NAQGDAYFTIQSTKVSTESTDAIVRSLTCYCP 349
+A A F + S K +TD + RSL CP
Sbjct: 1686 SAASAALFILASVKAPNTATDIMQRSLKNKCP 1717
>AY146757-1|AAO12072.1| 246|Anopheles gambiae odorant-binding
protein AgamOBP39 protein.
Length = 246
Score = 23.8 bits (49), Expect = 5.1
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +1
Query: 349 RAVTGQRPDNCIR*FR*HLCRLD---GEISVPLCVAR*SGPPNKGRSRKCLRV*SVCGKN 519
R T D C R + C LD G + S PP +++ +R S+C K
Sbjct: 118 RIATCPPQDTCARAYNGFRCFLDAQKGGFGAKDMQPQQSTPPQPFDAQEFIRSLSICAKL 177
Query: 520 H*VPDDPDEL 549
+P D +L
Sbjct: 178 QRIPKDRRDL 187
>AJ618928-1|CAF02007.1| 285|Anopheles gambiae odorant-binding
protein OBPjj83a protein.
Length = 285
Score = 23.8 bits (49), Expect = 5.1
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = +1
Query: 349 RAVTGQRPDNCIR*FR*HLCRLD---GEISVPLCVAR*SGPPNKGRSRKCLRV*SVCGKN 519
R T D C R + C LD G + S PP +++ +R S+C K
Sbjct: 118 RIATCPPQDTCARAYNGFRCFLDAQKGGFGAKDMQPQQSTPPQPFDAQEFIRSLSICAKL 177
Query: 520 H*VPDDPDEL 549
+P D +L
Sbjct: 178 QRIPKDRRDL 187
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 23.4 bits (48), Expect = 6.8
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -3
Query: 673 CDDGYVSDYNADTETP 626
C DGY SDY E P
Sbjct: 611 CPDGYYSDYVLQEEGP 626
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.0 bits (47), Expect = 9.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +2
Query: 428 ASPCALPANRVHRTRVDHAN 487
A CALPAN +T+ D +N
Sbjct: 15 AGCCALPANTNAQTKQDSSN 34
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 23.0 bits (47), Expect = 9.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 240 WITNISGAAETTPSFPT 190
WIT + A TT FPT
Sbjct: 118 WITTTTTEATTTTKFPT 134
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,936
Number of Sequences: 2352
Number of extensions: 16671
Number of successful extensions: 38
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -