Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29c03
         (689 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           23   6.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   6.9  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   9.1  

>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT +FPT
Sbjct: 118 WITTTTTEATTTTTFPT 134


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -1

Query: 563 YLLPLGHGACSNRSYCVLFATVVQKKVA 480
           Y  P+ HGA +NR  C      VQ+K A
Sbjct: 804 YAAPVWHGALTNRE-CRSLLKRVQRKAA 830


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 460 ASPRGYRDALLQIFICVSSRLNIHHELVN 374
           AS   +R ALL  F   +S   +H E++N
Sbjct: 307 ASALDHRAALLNGFSAAASYPKLHEEIIN 335


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 460 ASPRGYRDALLQIFICVSSRLNIHHELVN 374
           AS   +R ALL  F   +S   +H E++N
Sbjct: 307 ASALDHRAALLNGFSAAASYPKLHEEIIN 335


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 16  WITNISGAAETTPSFPT 66
           WIT  +  A TT  FPT
Sbjct: 118 WITTTTTEATTTTKFPT 134


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 810,042
Number of Sequences: 2352
Number of extensions: 17676
Number of successful extensions: 25
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)