Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29b23
(546 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41; Eum... 104 2e-21
UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q5DFZ2 Cluster: SJCHGC04573 protein; n=1; Schistosoma j... 34 1.9
UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation s... 34 1.9
UniRef50_UPI0000E23137 Cluster: PREDICTED: hypothetical protein;... 34 2.5
UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.5
UniRef50_Q6K4Y1 Cluster: Putative uncharacterized protein OSJNBa... 33 3.3
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 7.5
UniRef50_Q5EHP7 Cluster: G protein-coupled receptor 1; n=1; Enta... 32 7.5
UniRef50_Q8JZK2 Cluster: Skp1-like protein; n=1; unidentified|Re... 32 9.9
UniRef50_A2ZPS2 Cluster: Putative uncharacterized protein; n=3; ... 32 9.9
>UniRef50_Q9NV88 Cluster: Integrator complex subunit 9; n=41;
Eumetazoa|Rep: Integrator complex subunit 9 - Homo
sapiens (Human)
Length = 658
Score = 104 bits (249), Expect = 2e-21
Identities = 52/87 (59%), Positives = 58/87 (66%)
Frame = +2
Query: 284 MKLYCLSNDAAKPCFVLSFKELLIMLDCGLSSHSVLNFLPLPPVPSTRLASLPNYTPPHH 463
MKLYCLS PC VL FK IMLDCGL S LNFLPLP V S RL++LP ++
Sbjct: 1 MKLYCLSGHPTLPCNVLKFKSTTIMLDCGLDMTSTLNFLPLPLVQSPRLSNLPGWSLKDG 60
Query: 464 NDPLLEGELKECCGRVFVDSMPEFCPP 544
N L+ ELKEC G VFVDS+PEFC P
Sbjct: 61 N-AFLDKELKECSGHVFVDSVPEFCLP 86
>UniRef50_Q54SH0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 712
Score = 53.2 bits (122), Expect = 4e-06
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2
Query: 284 MKLYCLSNDAAKPCFVLSFKELLIMLDCGLSSHSVLNFLP 403
MK++CLS A PCF+L +K + I+LDC L S+L+FLP
Sbjct: 1 MKVHCLSQSAQSPCFLLEYKNVKILLDCALEISSILHFLP 40
>UniRef50_Q5DFZ2 Cluster: SJCHGC04573 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04573 protein - Schistosoma
japonicum (Blood fluke)
Length = 135
Score = 34.3 bits (75), Expect = 1.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 299 LSNDAAKPCFVLSFKELLIMLDCGLSSHSVLNFLPLPPVPSTRLASLPN 445
L+ D PC++L +++ ++LDC + ++ FLP + S + LP+
Sbjct: 14 LNTDVHSPCYLLHIRDVNLLLDCCMDLSNLSYFLPKHQLMSPGCSDLPD 62
>UniRef50_Q9V3D6 Cluster: Probable cleavage and polyadenylation
specificity factor subunit 2; n=7; Coelomata|Rep:
Probable cleavage and polyadenylation specificity factor
subunit 2 - Drosophila melanogaster (Fruit fly)
Length = 756
Score = 34.3 bits (75), Expect = 1.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 281 IMKLYCLSN--DAAKPCFVLSFKELLIMLDCGLSSHSVLNFL 400
I+KL+ +S D + PC++L ++ I+LDCG NF+
Sbjct: 4 IIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFI 45
>UniRef50_UPI0000E23137 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 194
Score = 33.9 bits (74), Expect = 2.5
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 359 LDCGLSSHSVLNFLPLPPVPSTRLASLPNYT-PPHHNDPLLEGELKE 496
L+ G S FLPLP P RLA + YT PP H + ++ KE
Sbjct: 133 LNGGRLSEGGKPFLPLPQAPEDRLADISRYTDPPPHQETDVQTPRKE 179
>UniRef50_Q55BS1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 784
Score = 33.9 bits (74), Expect = 2.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 281 IMKLYCLSN--DAAKPCFVLSFKELLIMLDCGLSSHSVLNFLPLPPV 415
I+K LS D + PC++L + I+LDCGLS + L+F L P+
Sbjct: 4 IIKFTALSGAKDESPPCYLLEIDDFCILLDCGLSYN--LDFSLLEPL 48
>UniRef50_Q6K4Y1 Cluster: Putative uncharacterized protein
OSJNBa0035A24.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBa0035A24.18 - Oryza sativa subsp. japonica (Rice)
Length = 60
Score = 33.5 bits (73), Expect = 3.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 378 PTLCSTSYRCLQCLALDSHPCLITH 452
PT CST+Y C Q L H C+++H
Sbjct: 35 PTSCSTTYPCFQPLVATIHSCVLSH 59
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 32.3 bits (70), Expect = 7.5
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 360 WIVGCHPTLCSTSYRCLQCLALDSHPC 440
WIV C LC S QCL L +HPC
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPC 241
>UniRef50_Q5EHP7 Cluster: G protein-coupled receptor 1; n=1;
Entamoeba histolytica|Rep: G protein-coupled receptor 1
- Entamoeba histolytica
Length = 491
Score = 32.3 bits (70), Expect = 7.5
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -1
Query: 375 DSPQSNIMRSSLKDNTKQGFAASLLKQ*SFIISLYIIFRICGRILFITKVCLC 217
D P I S + +N K + L+ + SF+ + Y IF + R++FI CLC
Sbjct: 175 DYPIYIIEISIINENVKD-IVSDLIFKASFVSTFYTIFELFWRLIFILFSCLC 226
>UniRef50_Q8JZK2 Cluster: Skp1-like protein; n=1; unidentified|Rep:
Skp1-like protein - unidentified
Length = 178
Score = 31.9 bits (69), Expect = 9.9
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +2
Query: 329 VLSFKELLIMLDCGLSSHSVLNFLPLPPVPSTRLASLPNYTPPHHNDPLLEGE 487
V S EL+ L + +PLP V ST L+ + + HHN+P+ E E
Sbjct: 36 VASMSELVKTLISDEQEDDEVQEIPLPNVKSTVLSKVIEFCSHHHNNPMREIE 88
>UniRef50_A2ZPS2 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 390
Score = 31.9 bits (69), Expect = 9.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 371 LSSHSVLNFLPLPPVPSTRLASLPNYTPPHHNDPLL 478
L +H + +F P+ P+P+T SL PP + P L
Sbjct: 182 LLNHHISSFFPVTPLPNTNHGSLAPLQPPRNEQPPL 217
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,266,874
Number of Sequences: 1657284
Number of extensions: 9528119
Number of successful extensions: 27902
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27867
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35405708495
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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