Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29b22
(723 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 48 1e-05
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 32 0.40
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 32 0.53
02_05_0772 - 31643142-31643329,31643650-31643683,31644037-316442... 31 0.70
12_01_0667 + 5674322-5674393,5674455-5675159,5676051-5676087,567... 31 1.2
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 31 1.2
11_04_0215 + 14944039-14944227,14944444-14944905,14945513-14945713 30 2.1
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 30 2.1
01_05_0405 - 21866058-21866255,21866711-21867172,21867389-21867577 30 2.1
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 29 2.8
07_03_0179 + 14801037-14801108,14801325-14802788 29 2.8
05_01_0141 - 937428-937717,938483-938705 29 2.8
01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664 29 2.8
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 29 3.7
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 29 3.7
05_04_0203 + 19016547-19016860,19017020-19017169,19017946-190180... 29 3.7
03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657 29 4.9
11_04_0184 - 14645630-14645905,14645997-14646701 28 6.5
10_01_0175 + 1959565-1960431,1960886-1960955,1961537-1961704,196... 28 6.5
05_03_0312 - 12172565-12172645,12172920-12172982,12173077-121731... 28 6.5
04_04_1377 - 33064906-33065607 28 6.5
03_01_0207 - 1633177-1633372,1633623-1633688,1633778-1633859,163... 28 6.5
11_03_0041 + 9165575-9165800,9166286-9166362 28 8.6
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 28 8.6
07_03_1565 - 27760407-27760463,27760905-27761513 28 8.6
05_07_0089 - 27619053-27620138 28 8.6
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 28 8.6
04_01_0401 - 5260308-5260361,5260457-5260507,5260764-5260809,526... 28 8.6
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 47.6 bits (108), Expect = 1e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Frame = +1
Query: 331 YDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFTHYEVSGAVWADSP 510
+D + N+ + + + +L+NP+E +++ E RE A+++F Y+V A +
Sbjct: 146 WDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNA 205
Query: 511 RMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLG 639
+ + G +LVV G VAAV V+ ++V P+G
Sbjct: 206 VLTSFASGRATSLVVDSGGGSTVVAAVHDGYVLQKSVATSPIG 248
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 32.3 bits (70), Expect = 0.40
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 23/193 (11%)
Frame = +1
Query: 172 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK 300
++ Q +V D G+ K GF G+ APR + S + E + K+
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 63
Query: 301 -VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKV 462
+ P E +D++ + H ++ + V P+E V++ E+ + P RE + ++
Sbjct: 64 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQI 123
Query: 463 LFTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGA 642
+F + A + G +V+ G + + + A+ L
Sbjct: 124 MFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAG 183
Query: 643 AAVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 184 RDLTDNLMKILTE 196
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 31.9 bits (69), Expect = 0.53
Identities = 35/193 (18%), Positives = 73/193 (37%), Gaps = 23/193 (11%)
Frame = +1
Query: 172 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK 300
++ Q +V D G+ K GF G+ APR + S + E + K+
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKR 63
Query: 301 -VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKV 462
+ P E +D++ + H ++ + V P++ V++ E+ L P RE + ++
Sbjct: 64 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKMTQI 123
Query: 463 LFTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGA 642
+F + A + G +V+ G + + + A+ L
Sbjct: 124 MFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILRLDLAG 183
Query: 643 AAVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 184 RDLTDHLMKILTE 196
>02_05_0772 -
31643142-31643329,31643650-31643683,31644037-31644221,
31644483-31645146
Length = 356
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 406 VVVESLLTPTLFRETLAKVLFTHYEVSGAVWADSPRMCAMTLGA 537
+ E+L+ P++FRET + + V + +D R CAM+LG+
Sbjct: 72 IAKENLMRPSIFRETKMQHMAAEAAVLLSKESDDMRSCAMSLGS 115
>12_01_0667 +
5674322-5674393,5674455-5675159,5676051-5676087,
5676238-5676335,5676452-5676475
Length = 311
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHH 550
H + LGLH HH HHGG G G G H
Sbjct: 32 HAAASPYLGLHHDHHH---HHGGGGGGGGMNGRH 62
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 178 KQAVVLDLGSEYTKFGFTGEAAPRCII 258
+ AVV+D G+ YTK GF G P C I
Sbjct: 6 RPAVVIDNGTGYTKMGFAGNVEP-CFI 31
>11_04_0215 + 14944039-14944227,14944444-14944905,14945513-14945713
Length = 283
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 622 QAQPLGAAAVRAELLHLLRQDCGPDLHLPDHVL 720
+ + LGAA R LL GPDL LPDHVL
Sbjct: 65 EKESLGAAWARFSLL----TQSGPDLSLPDHVL 93
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
G H HH H GH G HH G QR R H
Sbjct: 533 GRHHRHHHDHRHRHGH--SHGDHHHHYHGGHHQRRRHH 568
>01_05_0405 - 21866058-21866255,21866711-21867172,21867389-21867577
Length = 282
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 622 QAQPLGAAAVRAELLHLLRQDCGPDLHLPDHVL 720
+ + LGAA R LL GPDL LPDHVL
Sbjct: 65 EKESLGAAWARFSLL----TQSGPDLSLPDHVL 93
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 609 HHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRP 496
HH + HH + G G G+ D Q H +P+ RP
Sbjct: 657 HHQQNHHQNYHGRQGMNGNQYHD--RQNHNQNPQRFRP 692
>07_03_0179 + 14801037-14801108,14801325-14802788
Length = 511
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = +1
Query: 622 QAQPLGAAAVRAELLHLLRQDCGPDLHLPDHVL 720
+ + LGAA R LL GPDL LPDHVL
Sbjct: 26 EKESLGAAWAR----FLLLTQSGPDLSLPDHVL 54
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHH 550
HGGG G HG HH + GGH G G GHH
Sbjct: 138 HGGGLFG-GHHG--HHGGLF-GGHHGFGGHHGHH 167
>01_01_0800 - 6221306-6223016,6223418-6223443,6223653-6223664
Length = 582
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -1
Query: 609 HHARVHHGGH---LGLPGAQGHHQRDGRAQRHRAHPRTVRPH 493
HH RV HGG +G G+ G + D + Q+ H R ++ H
Sbjct: 44 HHHRVTHGGDGGGVGGGGSGGQEEADEQQQQQHDHHRLLQLH 85
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = -1
Query: 648 GGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQ 529
GG Q + A H R H GG G P + HH R GR Q
Sbjct: 34 GGRGQEGPIAIAAGHGRGHRGGGHGGPASPRHHLR-GRGQ 72
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 178 KQAVVLDLGSEYTKFGFTGEAAP 246
+ AVV+D G+ Y+K GF+G + P
Sbjct: 6 RPAVVIDNGTGYSKLGFSGNSEP 28
>05_04_0203 +
19016547-19016860,19017020-19017169,19017946-19018081,
19018222-19018323,19018556-19018675,19018800-19018880,
19019041-19019381,19020296-19020589,19020701-19021025,
19021167-19021400,19021506-19021760
Length = 783
Score = 29.1 bits (62), Expect = 3.7
Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +1
Query: 343 VNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFTHYEVSGAVWADSPRMCA 522
+ + LL + +V P ++V L +FR + V YE W D R
Sbjct: 586 IQLYFLLGLVYAVVTPILLPFIIVFFSLAYLVFRHQIINVYNQQYESGAQFWPDVQRRLV 645
Query: 523 MTL-GAPVTLVVSLGAREAEVAAV 591
+ L + + L+ L +EAE + V
Sbjct: 646 IALIVSQILLLGLLSTQEAEKSTV 669
>03_01_0499 - 3766713-3767159,3767742-3767813,3768004-3768657
Length = 390
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = -1
Query: 621 HGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
H Q H HH GH GHH + Q+H H
Sbjct: 31 HDPQEHHHHHHHGH------HGHHHEQQQQQQHHHH 60
>11_04_0184 - 14645630-14645905,14645997-14646701
Length = 326
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQG-HHQRDGRAQRHRA-HPRTVRP 496
G+ GAQH A GH G G HH G RH A H T P
Sbjct: 137 GVTGAQHGAGGLGTGHTAGYGTTGAHHGAGGLGTRHMAGHGATTTP 182
>10_01_0175 +
1959565-1960431,1960886-1960955,1961537-1961704,
1962570-1962676
Length = 403
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 604 VVLRAVQAQPLGAAAVRAELLHLLRQDCGPDLHLPDHVL 720
+ R + + LG A R LL GPDL LPDHVL
Sbjct: 131 ISFRQNEKEYLGVAWARFSLL----TQSGPDLSLPDHVL 165
>05_03_0312 -
12172565-12172645,12172920-12172982,12173077-12173152,
12174629-12174773,12175121-12175208
Length = 150
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 562 GAREAEVAAVVHSCVVLRAVQA--QPLGAAAVRAELLHLLRQDC 687
G R+++ V+HSC+ ++A A P A ++ + +RQ C
Sbjct: 59 GTRQSKCKVVLHSCIRIKAWYAPIDPYRAPPIQPSRIGTIRQTC 102
>04_04_1377 - 33064906-33065607
Length = 233
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = -1
Query: 609 HHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRP 496
HH HH HL G + HH + + QR R P
Sbjct: 182 HHHHHHHHPHLQPHGEEQHHHHEQKHQRTAWSGRAKNP 219
>03_01_0207 -
1633177-1633372,1633623-1633688,1633778-1633859,
1633942-1634037,1634413-1634518,1634602-1634661,
1635114-1635234,1635929-1636040,1636118-1636217,
1636328-1636382,1636489-1636595,1636798-1636850,
1636989-1637114,1637909-1638065,1638226-1638421,
1638917-1639073,1639139-1639379,1639475-1639605,
1639704-1639826,1639929-1639984,1640610-1640767,
1640847-1640984,1641070-1641123
Length = 896
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 241 APRCIIRSQFWCSTERRFKKVYEYSTPEELYDNLVN 348
A RC+ ++ ++CS + F + Y Y LY + +
Sbjct: 709 ATRCMTQAVYFCSGDLTFSEYYHYGLAASLYTHFTS 744
>11_03_0041 + 9165575-9165800,9166286-9166362
Length = 100
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHH-------ARVHHGGHLGLPGAQGHH-QRDGRAQRHRA 517
HG GA+ G A+ H AR H GG G G GHH R G RA
Sbjct: 24 HGVGAEDDGEDVAKRHRAASVARARAHCGGGDGKDGGSGHHGARGGSGGGRRA 76
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 604 VVLRAVQAQPLGAAAVRAELLHLLRQDCGPDLHLPDHVL 720
+ R + + LGAA + LL GPD LPDHVL
Sbjct: 132 ISFRQNEKESLGAAWAKFSLL----TQSGPDFSLPDHVL 166
>07_03_1565 - 27760407-27760463,27760905-27761513
Length = 221
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -1
Query: 648 GGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTV 502
GGGA++ H A+ HH GH LP A +R A RA P+ V
Sbjct: 18 GGGAKK-PFHFARSLTYHHHQGHRVLPPA-AKWRRHQLADEPRARPKDV 64
>05_07_0089 - 27619053-27620138
Length = 361
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 529 LGAPVTLVVSL--GAREAEVAAVVHSCVVLRAVQAQPLGAAAVRA 657
L A V LVV L G REA V A S V + P GA A RA
Sbjct: 205 LAAKVLLVVLLEEGNREAAVEAGAASAAVEAVAASGPAGATAERA 249
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 27.9 bits (59), Expect = 8.6
Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 11/177 (6%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRSQFWCSTERRFKKVYEYSTPEELYDNLVNMLHLL 363
++++D GS Y K+G++ AAP C+T F + +P +Y L + L +
Sbjct: 141 SIIVDGGSGYCKYGWSKYAAP------SGRCATFLEFGNI---ESP--MYARLRHFLSTI 189
Query: 364 YFRHVLVNPKERKVVVVESL----------LTPTLFRETLAKVLFTHYEVSGAVWADSPR 513
Y R + V P + ++VV L + +R+TL VLF V D
Sbjct: 190 YTR-MQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLF-DMNVPAVCSVDQAV 247
Query: 514 MCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLR-AVQAQPLGAAAVRAELLHLLRQ 681
+ +VV++G + + V+ V+ GA + L L++Q
Sbjct: 248 LALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQ 304
>04_01_0401 -
5260308-5260361,5260457-5260507,5260764-5260809,
5260884-5260933,5261019-5261062,5261231-5261310,
5261391-5261461,5261636-5261725,5262367-5262498,
5263420-5263470,5263615-5263704,5263841-5263878,
5265882-5266002,5267653-5267960,5268742-5268820,
5270019-5270113,5270288-5270428,5270792-5270831
Length = 526
Score = 27.9 bits (59), Expect = 8.6
Identities = 29/127 (22%), Positives = 53/127 (41%)
Frame = +1
Query: 307 EYSTPEELYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFTHYEVS 486
+YS + L D L + + + + +NP++R + +L T L +L +Y++
Sbjct: 216 DYSLHQVLED-LRTIWNWILTEKLHINPRDRHLYSAILVLGETFDNRGLM-ILMRNYKLR 273
Query: 487 GAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAAAVRAELL 666
A A G + VV++GA+ +V V + A P G + LL
Sbjct: 274 PEALA-----AAFGNGLSTSCVVNIGAQVTQVVCVEDGVALPHTALALPYGGDDISRCLL 328
Query: 667 HLLRQDC 687
+ R+ C
Sbjct: 329 WVQRRHC 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,519,684
Number of Sequences: 37544
Number of extensions: 338979
Number of successful extensions: 1071
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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