Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29b22
(723 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 39 0.003
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 33 0.16
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.21
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.21
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 33 0.21
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 33 0.21
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 33 0.21
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 33 0.21
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 33 0.21
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 33 0.27
U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical pr... 33 0.27
U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 31 1.1
U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 30 1.9
U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical pr... 29 2.5
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 29 2.5
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 29 2.5
AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical ... 29 2.5
Z82278-7|CAJ43451.1| 416|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 29 4.4
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 29 4.4
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 29 4.4
Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical pr... 28 5.9
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 5.9
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 28 7.8
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 28 7.8
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 28 7.8
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 28 7.8
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 28 7.8
U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical p... 24 9.2
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
G HG HHA HHG H GHH A H H H H
Sbjct: 504 GHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHH 552
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
G HGA H HHG H G + +H G +H T + H+ H
Sbjct: 687 GHHGAHHEHGAHHGAHHGHHDDKENHHHHGHHSKHSKKQHTKKSHKKSH 735
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 6/52 (11%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLG------LPGAQGHHQRDGRAQRHRAH 514
HG G HG HHA HHG H P GHH A H H
Sbjct: 419 HGEHGTHHGHHGEHHHAPAHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGH 470
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
G HG HHA HHG H A HH G H H
Sbjct: 456 GHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGH 493
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/57 (35%), Positives = 21/57 (36%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
HG G HG HH+ HHG H G G H H AH H A H
Sbjct: 648 HGSHGVHHGHHGT-HHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHH 703
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/97 (29%), Positives = 31/97 (31%), Gaps = 14/97 (14%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHG---------GHLGL---PGAQGHHQRDGRAQRHRAHPR 508
HG G HG HHA HHG GH G P GHH A H H
Sbjct: 519 HGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHG 578
Query: 507 TVRPHRARHLIMCEQYFG*CFPEQ--SRSEQGLHYNH 403
H H G P E G+H+ H
Sbjct: 579 HHGSHGVHHGHHESHGHGHHAPAHHGHHGEHGVHHGH 615
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 3/50 (6%)
Frame = -1
Query: 621 HGAQHHARV---HHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
HG HH+ HHG H P GHH A H H H H
Sbjct: 445 HGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHH 494
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 12/61 (19%)
Frame = -1
Query: 627 GLHGAQHHARVHHG---------GHLG---LPGAQGHHQRDGRAQRHRAHPRTVRPHRAR 484
G HG HHA HHG GH G P GHH A H H H
Sbjct: 469 GHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGH 528
Query: 483 H 481
H
Sbjct: 529 H 529
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQG-HHQRDGRAQRHRAH 514
HG + G H HH+ HHG H G G HH H +H
Sbjct: 399 HGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHHESH 445
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = -1
Query: 621 HGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
HG H HHG H G + HH G H H H
Sbjct: 399 HGVHHR---HHGEHHGTHHSPAHHGEHGTHHGHHGEHHHAPAHHGHH 442
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
H G G HG H HG P GHH G H H H H
Sbjct: 573 HHGHHGHHGSHGVHHGHHESHGHGHHAPAHHGHHGEHG--VHHGHHGAGYGAHHGHH 627
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 33.5 bits (73), Expect = 0.16
Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 23/189 (12%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK-VYE 309
A++LD GS K GF G+ APR + S + E + K+ +
Sbjct: 8 ALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 310 YSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFTH 474
P E +D++ + H ++ + V P+E V++ E+ L P RE + +++F
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 475 YEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAAAVR 654
+ A + G +V+ G + + A+ L +
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 655 AELLHLLRQ 681
L+ +L +
Sbjct: 188 DYLMKILTE 196
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 33.1 bits (72), Expect = 0.21
Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 23/193 (11%)
Frame = +1
Query: 172 QEKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK 300
+E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 301 -VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKV 462
+ P E +D++ + H ++ + + P+E V++ E+ L P RE + ++
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQI 122
Query: 463 LFTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGA 642
+F + + G +V+ G + + A+Q L
Sbjct: 123 MFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAG 182
Query: 643 AAVRAELLHLLRQ 681
+ ++ +L +
Sbjct: 183 RDLTDYMMKILTE 195
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 33.1 bits (72), Expect = 0.21
Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 23/192 (11%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK- 300
E A+V+D GS K GF G+ APR + S + E + K+
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 301 VYEYSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVL 465
+ P E +D++ + H ++ + V P+E V++ E+ L P RE + +++
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 466 FTHYEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAA 645
F + A + G +V+ G + + A+ L
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184
Query: 646 AVRAELLHLLRQ 681
+ L+ +L +
Sbjct: 185 DLTDYLMKILTE 196
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -1
Query: 633 RLGLHGAQHHA-RVH-HGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
R G HG++ H+ R H HGG G P G H G H R+ H H
Sbjct: 365 RHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGRSPSRHGHHH 417
Score = 29.5 bits (63), Expect = 2.5
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 9/66 (13%)
Frame = -1
Query: 651 HGGG-AQRLGLHGAQHHARVHHGGH---LGLPGAQ-GH----HQRDGRAQRHRAHPRTVR 499
HGG R G G +H HGGH G PG + GH H R GR H H
Sbjct: 238 HGGRHGSRSGSPGGRH-GHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSCSG 296
Query: 498 PHRARH 481
R RH
Sbjct: 297 SPRGRH 302
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
HG R G G +H HGG G P G H R G R+H H RH
Sbjct: 337 HGRHGSRSGSPGGRHG----HGGRHGPPHCPGRHGRHG----SRSHSPRGHGHGGRH 385
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 32.7 bits (71), Expect = 0.27
Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 23/189 (12%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRS-----------------QFWCSTERRFKK-VYE 309
A+V+D GS K GF G+ APR + S + E + K+ +
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILT 67
Query: 310 YSTPEE-----LYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTPTLFRETLAKVLFTH 474
P E +D++ + H ++ + V P+E V++ E+ L P RE + +++F
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 475 YEVSGAVWADSPRMCAMTLGAPVTLVVSLGAREAEVAAVVHSCVVLRAVQAQPLGAAAVR 654
+ A + G +V+ G + + A+ L +
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 655 AELLHLLRQ 681
L+ +L +
Sbjct: 188 DYLMKILTE 196
>U70845-2|AAB09100.1| 102|Caenorhabditis elegans Hypothetical
protein F22H10.2 protein.
Length = 102
Score = 32.7 bits (71), Expect = 0.27
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
H G G H HH +H GH G HH G H H
Sbjct: 52 HNNGGHHHGHHHHHHHGLLHGLGHALTGGHHHHHHHGGHHFGHHHH 97
>U23523-7|AAC46562.2| 85|Caenorhabditis elegans Hypothetical
protein F53A9.7 protein.
Length = 85
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 621 HGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
H HH HHGGH G+ + HH+ H H
Sbjct: 51 HEESHHGE-HHGGHHGVQHYESHHESHHHGGHHGHH 85
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/100 (22%), Positives = 39/100 (39%)
Frame = +1
Query: 382 VNPKERKVVVVESLLTPTLFRETLAKVLFTHYEVSGAVWADSPRMCAMTLGAPVTLVVSL 561
++PKE K+++ E L P RE + +V+F Y + A + G +VV
Sbjct: 100 IDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDS 159
Query: 562 GAREAEVAAVVHSCVVLRAVQAQPLGAAAVRAELLHLLRQ 681
G + V + + + + L+ LL Q
Sbjct: 160 GDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQ 199
>U21308-2|AAB93313.3| 507|Caenorhabditis elegans Hypothetical
protein ZK1290.6 protein.
Length = 507
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -1
Query: 648 GGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGRA 532
GGG G HG H HGGH G+ G H GR+
Sbjct: 50 GGGGGSHGGHGGSHGGS--HGGHGSHGGSYGGHSGHGRS 86
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRS 264
A V+D G+ YTK G+ G P+ II S
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPS 34
>U23523-6|AAC46561.1| 86|Caenorhabditis elegans Hypothetical
protein F53A9.6 protein.
Length = 86
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 621 HGAQHHARVHHGGHLGLPGAQGHHQRDGRAQRHRAH 514
H HH HHGGH G GH++ + H H
Sbjct: 52 HHDSHHHGGHHGGHHG-----GHYESHYESHHHHGH 82
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 264
E A+V+D GS K GF G+ APR + S
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPS 34
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 175 EKQAVVLDLGSEYTKFGFTGEAAPRCIIRS 264
E A+V+D GS K GF G+ APR + S
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPS 34
>AF039036-5|AAB94164.2| 351|Caenorhabditis elegans Hypothetical
protein E03D2.4 protein.
Length = 351
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -2
Query: 149 KAIFYLSIPFYSLKTIR*LFVSNLYLYFCYHTINYIG 39
+A FY SI + + ++LY+Y CYH I IG
Sbjct: 192 EAYFYHSIDHTINNLVVSMATTSLYIYLCYHLIYKIG 228
>Z82278-7|CAJ43451.1| 416|Caenorhabditis elegans Hypothetical
protein M162.11 protein.
Length = 416
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 307 EYSTPEELYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTP-TLFRETLAKVLFTHYEV 483
E +T E++ + +++H F E++ + + +LT TLF E L K+ YE
Sbjct: 319 ETNTVSEIHLQIDHVMHSKRFEIAKETFSEKEAIQIRDILTKSTLFEEGLIKLPDYDYEA 378
Query: 484 SGAVW 498
G V+
Sbjct: 379 IGKVF 383
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 627 GLHGAQHHARVHHGGHLGLPGAQGHHQRDGR 535
GL H H G +G PG QG DGR
Sbjct: 197 GLGRTGHDGNPGHPGEMGAPGPQGKQGPDGR 227
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRS 264
A+V+D GS K GF G+ APR + S
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPS 34
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 184 AVVLDLGSEYTKFGFTGEAAPRCIIRS 264
A+V+D GS K GF G+ APR + S
Sbjct: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPS 34
>Z75541-4|CAA99858.1| 146|Caenorhabditis elegans Hypothetical
protein F52B5.6 protein.
Length = 146
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 277 STERRFKKVYEYSTPEELYDNLVNMLHLLYFRHVLVNPKERKVVVVESLLTP 432
+TE KK+ +++T + D N H+ H L N K V V +L+TP
Sbjct: 72 TTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNV---KAVKVNTLITP 120
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGH-LGLPGAQGHH 550
HGGG HG H HGGH G G HH
Sbjct: 24 HGGGDHGGHDHGGHDHGGHDHGGHDHGGWGGHDHH 58
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGR 535
+GGG R G G R +GG G G G R GR
Sbjct: 671 YGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGR 709
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGR 535
+GGG R G G R +GG G G G R GR
Sbjct: 712 YGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGR 750
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 642 GAQRLGLHGAQHHARVHHGGHLGLPGAQGHH 550
GAQ G G Q A+ G H G GAQG H
Sbjct: 999 GAQ--GAQGEQFGAQGAQGAHFGAQGAQGAH 1027
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -1
Query: 642 GAQRLGLHGAQHHARVHHGGHLGLPGAQGHH 550
GAQ G G Q A+ G H G GAQG H
Sbjct: 1019 GAQ--GAQGEQFGAQGAQGAHFGAQGAQGAH 1047
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 651 HGGGAQRLGLHGAQHHARVHHGGHLGLPGAQGHHQRDGR 535
+GGG R G G R +GG G G G R GR
Sbjct: 671 YGGGGGRGGYGGGDRGGRGGYGGDRGGRGGYGGGDRGGR 709
>U41991-12|AAA83352.1| 251|Caenorhabditis elegans Hypothetical
protein C42D4.1 protein.
Length = 251
Score = 24.2 bits (50), Expect(2) = 9.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = -1
Query: 594 HHGGHLGLPGAQGHHQRDGRAQRHRAHPRTVRPHRARH 481
HH G +G + G RDG + + A+ + H+ H
Sbjct: 214 HHNGGIGSGISMGERHRDG--ESYDAYGNSKHHHKKHH 249
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = -1
Query: 621 HGAQHHARVHHGGHLG 574
HG H R HHG G
Sbjct: 171 HGHGHGHRFHHGRRFG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,195
Number of Sequences: 27780
Number of extensions: 293228
Number of successful extensions: 998
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -