Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29b21
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              29   0.19 
Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.      27   0.59 
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.59 
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.59 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.78 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    25   3.1  
DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormo...    23   9.6  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 304 QAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQNCQTQQESVHEGWERP 477
           Q H RQ Q + +   +  Q   +++W     R R++ ++ QQ+ Q QQ+    G  +P
Sbjct: 285 QQHQRQQQQQQQQRQQQQQQEQQELWTTVVRR-RQNTQQQQQSNQPQQQQQQTGRYQP 341



 Score = 23.8 bits (49), Expect = 5.5
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = +1

Query: 250 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQ 429
           Q +++ ++Q   +  R  Q   +Q Q + ++  R  Q   ++V +      R+  ++ QQ
Sbjct: 239 QQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQ-QQRVQQQNQQHQRQQQQQQQQ 297

Query: 430 NCQTQQESVHEGW 468
             Q QQ+   E W
Sbjct: 298 RQQQQQQEQQELW 310



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 19/80 (23%), Positives = 32/80 (40%)
 Frame = +1

Query: 241 APSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYER 420
           A S   +RGR+    ++ R  Q  H+Q + + +      Q   +Q  +    + R     
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQ-----QQQQQQQQQQQQQQQRNQQRE 259

Query: 421 LQQNCQTQQESVHEGWERPR 480
            QQ  Q QQ    E  ++ R
Sbjct: 260 WQQQQQQQQHQQREQQQQQR 279



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 15/70 (21%), Positives = 31/70 (44%)
 Frame = +1

Query: 244 PSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERL 423
           P Q  +R ++Q  H+  R  Q   +Q Q + +   +  Q   ++ W+    + +      
Sbjct: 217 PQQQEQRQQQQ-QHQQ-REQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQ 274

Query: 424 QQNCQTQQES 453
           QQ  + QQ++
Sbjct: 275 QQQQRVQQQN 284


>Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.
          Length = 111

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 392 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 478
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 392 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 478
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.59
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 392 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 478
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +1

Query: 250 QLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVREDYERLQQ 429
           Q +++G R  P +  +  Q   R  Q + +   +  Q G     R+ PP++R+  ++ Q 
Sbjct: 256 QQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE----RYVPPQLRQQRQQQQH 311

Query: 430 NCQTQQE 450
             Q QQ+
Sbjct: 312 QQQQQQQ 318



 Score = 24.6 bits (51), Expect = 3.1
 Identities = 19/83 (22%), Positives = 37/83 (44%)
 Frame = +1

Query: 232 QAAAPSQLRKRGRRQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVWRHAPPRVRED 411
           Q     Q +++ R+Q   +  +  Q  H+Q Q + +   +  Q   + +  H      + 
Sbjct: 335 QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSL-PHRKQTQLQL 393

Query: 412 YERLQQNCQTQQESVHEGWERPR 480
             RLQQ  Q QQ+S  +  ++P+
Sbjct: 394 SPRLQQQQQQQQQSQQQQQQQPQ 416



 Score = 23.8 bits (49), Expect = 5.5
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 358 QAGHEQVWRHAPPRVREDYERLQQNCQTQQE 450
           Q   +Q  R+ PP++R+  ++ Q+  Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 400 VREDYERLQQNCQTQQESVHEGWERPRG 483
           ++EDY RL+   Q  +E     +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -3

Query: 132 YLCYECGLSYTYF*CKNEIQQLSQAFNSITES*MLALCENCKNC 1
           YLC  CGL +        + + S+   S T +  L LC  C NC
Sbjct: 139 YLCNACGLYHKMNGMNRPLIKPSKRLVSQTATRRLGLC--CTNC 180



 Score = 23.4 bits (48), Expect = 7.2
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +2

Query: 599 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
           TT  L   H   +    SLS Q+       YGNN   GG
Sbjct: 349 TTAGLNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGG 387


>DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormone
           II protein.
          Length = 113

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 586 LVLQHDWSFGRTALPSVRLPGVA 654
           +    DW+ G+ A+P   + GVA
Sbjct: 33  VTFSRDWNAGKRAMPDSPVSGVA 55


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,668
Number of Sequences: 2352
Number of extensions: 15693
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)