Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29b21
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical pr... 154 5e-38
AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily a... 105 2e-23
U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical p... 92 3e-19
Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical pr... 76 3e-14
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 75 5e-14
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 69 3e-12
Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical pr... 68 6e-12
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical ... 62 3e-10
AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical... 62 5e-10
AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical... 58 6e-09
AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical ... 52 1e-08
U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical ... 56 3e-08
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 51 7e-07
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 51 7e-07
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 51 7e-07
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 51 7e-07
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 51 7e-07
Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical pr... 44 1e-04
L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-lik... 44 1e-04
L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-lik... 44 1e-04
AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine prot... 44 1e-04
U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protea... 43 2e-04
L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-lik... 43 2e-04
L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-lik... 43 2e-04
Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical pr... 40 0.002
M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific cy... 40 0.002
AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical ... 38 0.007
Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical pr... 37 0.017
Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical p... 37 0.017
L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-lik... 37 0.017
L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-lik... 37 0.017
AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z p... 33 0.21
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 29 4.4
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 4.4
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 29 4.4
U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protea... 28 7.8
L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protea... 28 7.8
>Z92812-8|CAB07275.1| 337|Caenorhabditis elegans Hypothetical
protein T03E6.7 protein.
Length = 337
Score = 154 bits (374), Expect = 5e-38
Identities = 74/169 (43%), Positives = 111/169 (65%)
Frame = +2
Query: 215 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 394
E+W +K Y SE E+ M+ + ++ I HN+ + +G ++++G+N D+
Sbjct: 30 EKWDDYKEDFDKEY-SESEEQTYMEAFVKNMIHIENHNRDHRLGRKTFEMGLNHIADLPF 88
Query: 395 HEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGK 574
++ K +NG+ + ++ +K S F++P NV++P++VDWR VTD+K+QG
Sbjct: 89 SQYRK-LNGYRRLFGDSR---IKNSS----SFLAPFNVQVPDEVDWRDTHLVTDVKNQGM 140
Query: 575 CGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLM 721
CGSCW+FS TGALEGQH R+ G LVSLSEQNL+DCS +YGN+GCNGGLM
Sbjct: 141 CGSCWAFSATGALEGQHARKLGQLVSLSEQNLVDCSTKYGNHGCNGGLM 189
>AF016448-1|AAB65956.2| 477|Caenorhabditis elegans Temporarily
assigned gene nameprotein 196 protein.
Length = 477
Score = 105 bits (253), Expect = 2e-23
Identities = 61/160 (38%), Positives = 86/160 (53%)
Frame = +2
Query: 239 QHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTMN 418
+H Y ++ E R +++ ++ +I + QK E G Y G K+ DM EF K M
Sbjct: 180 RHEKKYTNKREVLKRFRVFKKNAKVI-RELQKNEQGTAVY--GFTKFSDMTTMEFKKIML 236
Query: 419 GFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFS 598
+ + + +Y + ++ LPE DWR+ GAVT +K+QG CGSCW+FS
Sbjct: 237 PY----QWEQPVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVKNQGNCGSCWAFS 292
Query: 599 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGL 718
TTG +EG F LVSLSEQ L+DC + GCNGGL
Sbjct: 293 TTGNVEGAWFIAKNKLVSLSEQELVDCDSM--DQGCNGGL 330
>U64859-10|AAC69091.2| 383|Caenorhabditis elegans Hypothetical
protein R09F10.1 protein.
Length = 383
Score = 92.3 bits (219), Expect = 3e-19
Identities = 57/168 (33%), Positives = 93/168 (55%)
Frame = +2
Query: 212 KEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDML 391
++ ++ F L+ Y S E +R +I+ + I + ++ +GL L +N++ D
Sbjct: 79 EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNV-IEFEAEEERNLGL---DLDVNEFTDWT 134
Query: 392 HHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQG 571
E K + NK K++ + GS I PA++ DWR+ G +T IK+QG
Sbjct: 135 DEELQKMVQE-NKYTKYDFDTPKFEGSYLETGVIRPASI------DWREQGKLTPIKNQG 187
Query: 572 KCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
+CGSCW+F+T ++E Q+ + G LVSLSEQ ++DC + NNGC+GG
Sbjct: 188 QCGSCWAFATVASVEAQNAIKKGKLVSLSEQEMVDCDGR--NNGCSGG 233
>Z49207-6|CAJ58500.1| 348|Caenorhabditis elegans Hypothetical
protein R07E3.1b protein.
Length = 348
Score = 75.8 bits (178), Expect = 3e-14
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +2
Query: 209 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 388
+ +E+ A+ + +Y + E R+ Y IA N + E G Y G N D
Sbjct: 32 IAKEYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEY--GHNDMSDW 89
Query: 389 LHHEFVKTM---NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 559
EF KT+ + + + K + + S+ K ++ P+ DWR +T +
Sbjct: 90 TDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKK--GESSSPFPDFFDWRDKNVITPV 147
Query: 560 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
K QG+CGSCW+F++T +E G +LSEQ L+DC +N C+GG
Sbjct: 148 KAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDGG 197
>Z49207-5|CAA89070.1| 402|Caenorhabditis elegans Hypothetical
protein R07E3.1a protein.
Length = 402
Score = 75.8 bits (178), Expect = 3e-14
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +2
Query: 209 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 388
+ +E+ A+ + +Y + E R+ Y IA N + E G Y G N D
Sbjct: 86 IAKEYIAYTEKFDKSYATSQESLKRLNAYYNTDENIANWNIQNEHGSAEY--GHNDMSDW 143
Query: 389 LHHEFVKTM---NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 559
EF KT+ + + + K + + S+ K ++ P+ DWR +T +
Sbjct: 144 TDEEFEKTLLPKSFYKRLHKEAEFIEPIPESLTAKK--GESSSPFPDFFDWRDKNVITPV 201
Query: 560 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
K QG+CGSCW+F++T +E G +LSEQ L+DC +N C+GG
Sbjct: 202 KAQGQCGSCWAFASTATVEAAWAIAHGEKRNLSEQTLLDC--DLVDNACDGG 251
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 74.9 bits (176), Expect = 5e-14
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 3/165 (1%)
Frame = +2
Query: 230 FKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVK 409
F +++ Y +E E R I++ + ++ ++N K + G V+Y+L N + D+ E+ K
Sbjct: 54 FLVKYLREYPNEYEIVKRFTIFSRNLDLVERYN-KEDAGKVTYEL--NDFSDLTEEEWKK 110
Query: 410 TMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK-HGA--VTDIKDQGKCG 580
+ H++ S++ I N LP VDWR +G VT IK QG CG
Sbjct: 111 YL--MTPKPDHSEK------SLKPKTLIDKKN--LPNSVDWRNVNGTNHVTGIKYQGPCG 160
Query: 581 SCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
SCW+F+T A+E G L SLS Q L+DC+ ++ C GG
Sbjct: 161 SCWAFATAAAIESAVSISGGGLQSLSSQQLLDCT--VVSDKCGGG 203
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 68.9 bits (161), Expect = 3e-12
Identities = 49/174 (28%), Positives = 74/174 (42%), Gaps = 12/174 (6%)
Frame = +2
Query: 230 FKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVK 409
FK ++ Y+ E E+ R + + + + K N K + + G+NK+ D+ EF
Sbjct: 46 FKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHG 105
Query: 410 TMNGF---NKTAKHNKNLYMKGGSVRGAKFISPAN----VKLPEQVDWRKHGA-----VT 553
++ N T N K R A + + P+ D R V
Sbjct: 106 RLSNVVPSNNTGLPMLNFDKKKPDFRAADMNKTRHKRRSTRYPDYFDLRNEKINGRYIVG 165
Query: 554 DIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
IKDQG+C CW F+ T +E + SG SLS+Q + DC + G GC GG
Sbjct: 166 PIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDCGTE-GTPGCKGG 218
>Z70750-3|CAA94738.1| 374|Caenorhabditis elegans Hypothetical
protein C50F4.3 protein.
Length = 374
Score = 68.1 bits (159), Expect = 6e-12
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 5/172 (2%)
Frame = +2
Query: 215 EEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLH 394
+E+ F ++++ NY+ E+E FR + + + + K N+ + K G+NK+ D+
Sbjct: 45 KEFEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSK 104
Query: 395 HEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK-----HGAVTDI 559
E + F K+N N + +++ + + LP+ D R H + I
Sbjct: 105 KEIHGMYSKFG-PPKNNTN--VPKFNLKNLR-VKRQMEGLPKTFDLRNKKVGGHYIIGPI 160
Query: 560 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
K Q C CW F+ T E ++LSEQ + DC+ ++G GCNGG
Sbjct: 161 KTQDSCACCWGFAATAVAEAALTVHLKKAMNLSEQEVCDCAPKHG-PGCNGG 211
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 64.9 bits (151), Expect = 6e-11
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Frame = +2
Query: 227 AFK-LQHRLNYESEVEDNF-RMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 400
AFK L +N+ S ++ R +Y++ K + +HN YE+G+ SYK+ N +
Sbjct: 134 AFKSLMDVINFNSTAKEGLKRFNVYSKVKKEVDEHNIMYELGMSSYKMSTN--------Q 185
Query: 401 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCG 580
F ++G N + +V A S VDWR + I DQ CG
Sbjct: 186 FSVALDGEVAPLTLNLDALTPTATVIPATISSRKKRDTEPTVDWRPF--LKPILDQSTCG 243
Query: 581 SCWSFSTTGALEGQHFRQSGY-LVSLSEQNLIDCSEQ----YG--NNGCNGG 715
CW+FS +E F GY SLS Q L+ C + YG N GC GG
Sbjct: 244 GCWAFSMISMIE-SFFAIQGYNTSSLSVQQLLTCDTKVDSTYGLANVGCKGG 294
>AC024860-3|AAK29985.1| 345|Caenorhabditis elegans Hypothetical
protein Y71H2AR.2 protein.
Length = 345
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 518 EQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFR-QSGYLVSLSEQNLIDCSEQYG 694
E +DWR+ G V +KDQGKC + +F+ T ++E + + +G L+S SEQ LIDC++Q G
Sbjct: 84 EFLDWREKGIVGPVKDQGKCNASHAFAITSSIESMYAKATNGTLLSFSEQQLIDCNDQ-G 142
Query: 695 NNGC 706
GC
Sbjct: 143 YKGC 146
>AL110477-10|CAB54334.1| 328|Caenorhabditis elegans Hypothetical
protein Y113G7B.15 protein.
Length = 328
Score = 61.7 bits (143), Expect = 5e-10
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 10/170 (5%)
Frame = +2
Query: 236 LQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHEFVKTM 415
+ H+ +Y + E + R+ +A++ I + N K + G NK+ D E +
Sbjct: 1 MHHKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQE-LSAR 59
Query: 416 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVK-----LPEQVDWRK-----HGAVTDIKD 565
N H K RG++ K +P+ D R V +KD
Sbjct: 60 NSKIHPKNHTDLPIYKPRHPRGSRNHHNKRSKRQSGDIPDYFDLRDIYVDGSPVVGPVKD 119
Query: 566 QGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 715
Q +CG CW+F+TT E + S SLS+Q + DC++ GC GG
Sbjct: 120 QEQCGCCWAFATTAITEAANTLYSKSFTSLSDQEICDCADSGDTPGCVGG 169
>AC024859-23|ABD63209.1| 299|Caenorhabditis elegans Hypothetical
protein Y71H2AM.25 protein.
Length = 299
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 518 EQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFR-QSGYLVSLSEQNLIDCSEQYG 694
E +DWR G V +KDQGKC + +F+ + ++E + + +G L+S SEQ LIDC + +G
Sbjct: 84 EFLDWRDKGIVGPVKDQGKCNASHAFAISSSIESMYAKATNGSLLSFSEQQLIDC-DDHG 142
Query: 695 NNGC 706
GC
Sbjct: 143 FKGC 146
>AL021497-1|CAA16404.1| 382|Caenorhabditis elegans Hypothetical
protein Y51A2D.1 protein.
Length = 382
Score = 52.4 bits (120), Expect(2) = 1e-08
Identities = 31/141 (21%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Frame = +2
Query: 209 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 388
V +E+ FK + Y+SE E+ R++ + + ++ + + N+ + + +N++ D+
Sbjct: 40 VYQEFVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDL 99
Query: 389 LHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA-----VT 553
E + ++ F N + + G N + D R V
Sbjct: 100 TTSELHQRLSRFPPNLTENSVFHKNFKKLLGKTRTKRQNSEFARNFDLRSQKVNGRYIVG 159
Query: 554 DIKDQGKCGSCWSFSTTGALE 616
IK+QG+C CW F+ T LE
Sbjct: 160 PIKNQGQCACCWGFAVTAMLE 180
Score = 24.2 bits (50), Expect(2) = 1e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 647 VSLSEQNLIDCSEQYGNNGCNGG 715
+S S+Q + DC+ GC GG
Sbjct: 221 LSFSDQEMCDCATDGTKAGCAGG 243
>U80843-8|AAB37963.1| 250|Caenorhabditis elegans Hypothetical
protein C32B5.7 protein.
Length = 250
Score = 56.8 bits (131), Expect = 1e-08
Identities = 25/59 (42%), Positives = 36/59 (61%)
Frame = +2
Query: 503 NVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDC 679
N K P +DWR G V +KDQG C + ++F+ A+E + +G L+S SEQ +IDC
Sbjct: 66 NAKKPF-LDWRDEGVVGPVKDQGNCNASYAFAAISAIESMYAIANGQLLSFSEQQIIDC 123
>AF025465-6|AAB71030.1| 299|Caenorhabditis elegans Hypothetical
protein K02E7.10 protein.
Length = 299
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Frame = +2
Query: 524 VDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFR-QSGYLVSLSEQNLIDCS 682
+DWR+ G V +KDQGKC + ++F+ A+E + + +G L+S SEQ +IDC+
Sbjct: 84 LDWREKGIVGPVKDQGKCNASYAFAAIAAIESMYAKANNGKLLSFSEQQIIDCA 137
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 SVRGAKFISPA---NVKLPEQVD----WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQ-H 625
SV+G + +S ++ +PE D W K ++ I+DQ CGSCW+F A+ +
Sbjct: 87 SVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRIC 146
Query: 626 FRQSGYL-VSLSEQNLIDCSEQYGNNGCNGG 715
G L V+LS +L+ C + G GCNGG
Sbjct: 147 IASHGELQVTLSADDLLSCCKSCG-FGCNGG 176
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 SVRGAKFISPA---NVKLPEQVD----WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQ-H 625
SV+G + +S ++ +PE D W K ++ I+DQ CGSCW+F A+ +
Sbjct: 78 SVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRIC 137
Query: 626 FRQSGYL-VSLSEQNLIDCSEQYGNNGCNGG 715
G L V+LS +L+ C + G GCNGG
Sbjct: 138 IASHGELQVTLSADDLLSCCKSCG-FGCNGG 167
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 SVRGAKFISPA---NVKLPEQVD----WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQ-H 625
SV+G + +S ++ +PE D W K ++ I+DQ CGSCW+F A+ +
Sbjct: 88 SVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRIC 147
Query: 626 FRQSGYL-VSLSEQNLIDCSEQYGNNGCNGG 715
G L V+LS +L+ C + G GCNGG
Sbjct: 148 IASHGELQVTLSADDLLSCCKSCG-FGCNGG 177
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 SVRGAKFISPA---NVKLPEQVD----WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQ-H 625
SV+G + +S ++ +PE D W K ++ I+DQ CGSCW+F A+ +
Sbjct: 88 SVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRIC 147
Query: 626 FRQSGYL-VSLSEQNLIDCSEQYGNNGCNGG 715
G L V+LS +L+ C + G GCNGG
Sbjct: 148 IASHGELQVTLSADDLLSCCKSCG-FGCNGG 177
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 51.2 bits (117), Expect = 7e-07
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 9/91 (9%)
Frame = +2
Query: 470 SVRGAKFISPA---NVKLPEQVD----WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQ-H 625
SV+G + +S ++ +PE D W K ++ I+DQ CGSCW+F A+ +
Sbjct: 88 SVKGKQHLSKTKDLDLDIPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRIC 147
Query: 626 FRQSGYL-VSLSEQNLIDCSEQYGNNGCNGG 715
G L V+LS +L+ C + G GCNGG
Sbjct: 148 IASHGELQVTLSADDLLSCCKSCG-FGCNGG 177
>Z81070-2|CAB03007.1| 491|Caenorhabditis elegans Hypothetical
protein F26E4.3 protein.
Length = 491
Score = 45.2 bits (102), Expect = 5e-05
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +2
Query: 509 KLPEQVDWR-KHGA-VTDIKDQGKCGSCWSFSTTG-ALEGQHFRQSGYLVS-LSEQNLID 676
+LPE D R K G + + DQG CGS WS STT + + G + S LS Q L+
Sbjct: 222 ELPEHFDARDKWGPLIHPVADQGDCGSSWSVSTTAISSDRLAIISEGRINSTLSSQQLLS 281
Query: 677 CSEQYGNNGCNGGLM 721
C+ Q+ GC GG +
Sbjct: 282 CN-QHRQKGCEGGYL 295
>Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical
protein F57F5.1 protein.
Length = 400
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSG--YLVSLSEQNLIDCSEQYGNNG 703
W +++ I+DQ CGSCW+ S + + S ++S+S ++ C NG
Sbjct: 156 WPNCPSISKIRDQSSCGSCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNG 215
Query: 704 CNGG 715
CNGG
Sbjct: 216 CNGG 219
>L39927-1|AAA98784.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLID-CSEQYG-N 697
W ++ +I+DQ CGSCW+F+ A+ + S V+ LS ++L+ C+ +
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCG 151
Query: 698 NGCNGG 715
NGC GG
Sbjct: 152 NGCEGG 157
>L39896-1|AAA98786.1| 344|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 344
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLID-CSEQYG-N 697
W ++ +I+DQ CGSCW+F+ A+ + S V+ LS ++L+ C+ +
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCG 151
Query: 698 NGCNGG 715
NGC GG
Sbjct: 152 NGCEGG 157
>AF016426-3|AAB65346.1| 344|Caenorhabditis elegans Cysteine
protease related protein 5 protein.
Length = 344
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLID-CSEQYG-N 697
W ++ +I+DQ CGSCW+F+ A+ + S V+ LS ++L+ C+ +
Sbjct: 92 WPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLLSCCTGMFSCG 151
Query: 698 NGCNGG 715
NGC GG
Sbjct: 152 NGCEGG 157
>U50313-3|AAA92327.1| 335|Caenorhabditis elegans Cysteine protease
related protein 4 protein.
Length = 335
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 521 QVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLIDCSEQYG 694
+ W ++ +I+DQ CGSCW+F+ A + S V+ LS ++++ C G
Sbjct: 88 RTQWPNCMSINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCG 147
Query: 695 NNGCNGG 715
GC GG
Sbjct: 148 -YGCEGG 153
>L39926-1|AAA98783.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 521 QVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLIDCSEQYG 694
+ W ++ +I+DQ CGSCW+F+ A + S V+ LS ++++ C G
Sbjct: 88 RTQWPNCMSINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCG 147
Query: 695 NNGCNGG 715
GC GG
Sbjct: 148 -YGCEGG 153
>L39895-1|AAA98785.1| 335|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 335
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 521 QVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLIDCSEQYG 694
+ W ++ +I+DQ CGSCW+F+ A + S V+ LS ++++ C G
Sbjct: 88 RTQWPNCMSINNIRDQSDCGSCWAFAAAEAASDRFCIASNGAVNTLLSAEDVLSCCSNCG 147
Query: 695 NNGCNGG 715
GC GG
Sbjct: 148 -YGCEGG 153
>Z81103-3|CAB03209.1| 467|Caenorhabditis elegans Hypothetical
protein M04G12.2 protein.
Length = 467
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Frame = +2
Query: 512 LPEQVDWRKHGAV---TDIKDQG---KCGSCWSFSTTGALEGQ-HFRQSGY--LVSLSEQ 664
LP DWR V + ++Q CGSCW F TTGAL + + + G + LS Q
Sbjct: 221 LPTGWDWRNVSGVNYCSPTRNQHIPVYCGSCWVFGTTGALNDRFNVARKGRWPMTQLSPQ 280
Query: 665 NLIDCSEQYGNNGCNGG 715
+IDC+ G C GG
Sbjct: 281 EIIDCN---GKGNCQGG 294
>Z78012-1|CAB01410.2| 329|Caenorhabditis elegans Hypothetical
protein C52E4.1 protein.
Length = 329
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 521 QVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHF--RQSGYLVSLSEQNLIDCSEQYG 694
+ W + ++ I+DQ CGSCW+F + + + +S +L+ C
Sbjct: 92 RTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSC 151
Query: 695 NNGCNGG 715
NGC GG
Sbjct: 152 GNGCEGG 158
>M74797-1|AAB88058.1| 329|Caenorhabditis elegans gut-specific
cysteine protease-1 protein.
Length = 329
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 521 QVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHF--RQSGYLVSLSEQNLIDCSEQYG 694
+ W + ++ I+DQ CGSCW+F + + + +S +L+ C
Sbjct: 92 RTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLLSCCGSSC 151
Query: 695 NNGCNGG 715
NGC GG
Sbjct: 152 GNGCEGG 158
>AF016426-2|AAB65345.1| 335|Caenorhabditis elegans Hypothetical
protein W07B8.4 protein.
Length = 335
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +2
Query: 512 LPEQVDWRKHG----AVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLI 673
+P+ D R H +V +I+DQ CGSCW+ + A+ + S V+ LS ++++
Sbjct: 73 IPDSYDVRDHWPQCISVNNIRDQSHCGSCWAVAAAEAISDRTCIASNGDVNTLLSAEDIL 132
Query: 674 DCSEQYGN--NGCNGG 715
C N +GC GG
Sbjct: 133 TCCTGKFNCGDGCEGG 148
>Z81531-8|CAB04322.2| 344|Caenorhabditis elegans Hypothetical
protein F36D3.9 protein.
Length = 344
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS--LSEQNLIDCSEQYGNNG 703
W + ++ I++Q CGSCW+FST + + S +S +L+ C G
Sbjct: 111 WPQCKSMKLIREQSNCGSCWAFSTAEVISDRTCIASNGTQQPIISPTDLLTCCGMSCGEG 170
Query: 704 CNGG 715
C+GG
Sbjct: 171 CDGG 174
>AC024844-4|AAK29958.1| 421|Caenorhabditis elegans Hypothetical
protein Y65B4A.2 protein.
Length = 421
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 530 WRKHGAVTDIKDQGKCGSCWSFSTTG-ALEGQHFRQSGYLVS-LSEQNLIDCSEQYGNNG 703
W +++++ +QG CGSC++ + G A + +G S LSE+++I C GN
Sbjct: 148 WPNCPSISNVPNQGGCGSCFAVAAAGVASDRACIHSNGTFKSLLSEEDIIGCCSVCGN-- 205
Query: 704 CNGG 715
C GG
Sbjct: 206 CYGG 209
>Z82057-4|CAB61024.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 473 VRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS 652
VRG P + W + I++Q CGSCW+F + + QS
Sbjct: 83 VRGEIVPEPLPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQ 142
Query: 653 --LSEQNLIDCSEQYGNNGCNGG 715
+S ++++ C GC GG
Sbjct: 143 PVISVEDILSCCGTTCGYGCKGG 165
>Z81119-10|CAB61032.2| 370|Caenorhabditis elegans Hypothetical
protein T10H4.12 protein.
Length = 370
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 473 VRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS 652
VRG P + W + I++Q CGSCW+F + + QS
Sbjct: 83 VRGEIVPEPLPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQ 142
Query: 653 --LSEQNLIDCSEQYGNNGCNGG 715
+S ++++ C GC GG
Sbjct: 143 PVISVEDILSCCGTTCGYGCKGG 165
>L39925-1|AAA98782.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 473 VRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS 652
VRG P + W + I++Q CGSCW+F + + QS
Sbjct: 83 VRGEIVPEPLPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQ 142
Query: 653 --LSEQNLIDCSEQYGNNGCNGG 715
+S ++++ C GC GG
Sbjct: 143 PVISVEDILSCCGTTCGYGCKGG 165
>L39890-1|AAA98788.1| 370|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 370
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +2
Query: 473 VRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVS 652
VRG P + W + I++Q CGSCW+F + + QS
Sbjct: 83 VRGEIVPEPLPDTFDAREKWPDCNTIKLIRNQATCGSCWAFGAAEVISDRVCIQSNGTQQ 142
Query: 653 --LSEQNLIDCSEQYGNNGCNGG 715
+S ++++ C GC GG
Sbjct: 143 PVISVEDILSCCGTTCGYGCKGG 165
>AF003148-6|AAB54210.2| 306|Caenorhabditis elegans Cathepsin z
protein 1 protein.
Length = 306
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Frame = +2
Query: 512 LPEQVDWRKHGAVTDIK-DQGK-----CGSCWSFSTTGALEGQ---HFRQSGYLVSLSEQ 664
LP+ DWR + D+ + CGSCW+F T AL + + + LS Q
Sbjct: 65 LPKTWDWRDANGINYASADRNQHIPQYCGSCWAFGATSALADRINIKRKNAWPQAYLSVQ 124
Query: 665 NLIDCS 682
+IDCS
Sbjct: 125 EVIDCS 130
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -1
Query: 464 PSCTDSCCVWQFCXXXXXXXRTRGGACLHTCS--CPACKK-RGPFRTSGCVWR*CACAQR 294
P C SC Q C + AC +CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 293 ISSCGN 276
S CGN
Sbjct: 413 YSPCGN 418
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -1
Query: 464 PSCTDSCCVWQFCXXXXXXXRTRGGACLHTCS--CPACKK-RGPFRTSGCVWR*CACAQR 294
P C SC Q C + AC +CS C A + + P +T C+C Q
Sbjct: 357 PQCQQSC--QQQCVQQQQPMQQCAPACTQSCSQSCSAAQPAQMPCQTQSV--NSCSCQQN 412
Query: 293 ISSCGN 276
S CGN
Sbjct: 413 YSPCGN 418
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -1
Query: 464 PSCTDSCCVWQFCXXXXXXXRTRGGACLHTCSCPACKKRGPFRTSGCVWR*---CACAQR 294
P C SC Q C + AC +CS +C P + C+ + C+C Q
Sbjct: 504 PQCQQSC--QQQCIQQLQPIQQCATACTQSCS-QSCSAAQPAQMP-CITQSANSCSCQQN 559
Query: 293 ISSCGN 276
S CGN
Sbjct: 560 YSPCGN 565
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -3
Query: 438 LAVLLKPFIVFTNSWWSMSPYLFMPSL*ETR-PISYFWL 325
+ ++L PF+ + N+WWS + + + L ISYF+L
Sbjct: 408 IGMILAPFLTYANTWWSPAVNVTVIVLGSANLLISYFFL 446
>U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protease
protein.
Length = 198
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 581 SCWSFSTTGALEGQHFRQSGY--LVSLSEQNLIDCSEQYGNNGCNGG 715
SCW+ S + + S ++S+S ++ C NGCNGG
Sbjct: 1 SCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGG 47
>L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protease
protein.
Length = 133
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 581 SCWSFSTTGALEGQHFRQSGY--LVSLSEQNLIDCSEQYGNNGCNGG 715
SCW+ S + + S ++S+S ++ C NGCNGG
Sbjct: 1 SCWAVSAAETISDRICIASNAKTILSISADDINACCGMVCGNGCNGG 47
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,074,171
Number of Sequences: 27780
Number of extensions: 346187
Number of successful extensions: 1241
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -