Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29b05
         (174 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    19   6.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    19   6.2  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    18   8.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    18   8.2  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 25  CTFILSFNSKLFVI 66
           C FI+ F   +FVI
Sbjct: 322 CNFIILFYLSVFVI 335


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 18.6 bits (36), Expect = 6.2
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 1   LLFEILYNC 27
           +LF IL+NC
Sbjct: 283 MLFTILWNC 291


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +1

Query: 10  EILYNCTFILSFNSKL 57
           E+LY C++ +   +K+
Sbjct: 176 EVLYICSYTVLIRNKI 191


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 18.2 bits (35), Expect = 8.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -2

Query: 74  FPYITNNLLLKDSMNVQLYKISN 6
           FP++ N L+        +++ISN
Sbjct: 506 FPHLFNGLVDYSLWKALIFQISN 528


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,776
Number of Sequences: 336
Number of extensions: 175
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 37
effective length of database: 110,153
effective search space used:  2203060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)