Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29b02
         (555 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   1.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   1.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.4  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.1  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   3.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   4.1  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   4.1  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   5.5  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.2  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.5  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 51  AYNNIKIQILVIWNVNCS 104
           A N +KI +++IW+ N S
Sbjct: 443 ANNGVKIPLVIIWSSNLS 460


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 2/67 (2%)
 Frame = +2

Query: 185 CSTASVLLWQHCLFTMLFSM--SILHQFHLLPSYVCTNAGAGNYCVLYHFSSRIT**TSK 358
           C   + L     L T+L  +  +I   +HL   + CT+     + ++   S  +      
Sbjct: 225 CKKINKLYGHQLLLTILTYLIWTIYEMYHLAILWSCTSTNCPRFLIMLALSYTVIQEVML 284

Query: 359 ATVLYKC 379
            T+L+ C
Sbjct: 285 FTILWNC 291



 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 146 YLTLFVLIVMFVLCTTIYIPNNKYLYFDI 60
           Y++L  L+  FV C  IY+    Y+Y+ +
Sbjct: 137 YVSLLQLV--FVFCYFIYLFTVYYIYYSV 163


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 97   FTFQITSICILILLYALINIQI 32
            +   I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 97   FTFQITSICILILLYALINIQI 32
            +   I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 97   FTFQITSICILILLYALINIQI 32
            +   I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = -3

Query: 97   FTFQITSICILILLYALINIQI 32
            +   I S+ +L++LY++IN+ +
Sbjct: 1035 YLLSIPSMYLLLILYSIINLNV 1056


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
 Frame = -1

Query: 252 KMDMLNNIVNKQCCHSNTLAVLQNKGPILHPFL-----VF-ISHFVCVDCDVCFMYYNLH 91
           + +M+NNI+ +    S T+  L N   IL   +     +F     +C   +   +  +LH
Sbjct: 115 RFEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNFVLLIGDLH 174

Query: 90  SK*QVSVF*YYYTH 49
           +   +  F  +Y H
Sbjct: 175 TSIYIIFFDMFYQH 188


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 441 VGYLAVYRITFATCLFFLLMALIMIGVKS 527
           VG  + Y +TF     FL++ L + G+ S
Sbjct: 280 VGNASGYTVTFLCLYLFLIITLTIYGLLS 308


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 173 QYCTHF*FLYLTLFVLIVMF 114
           +YC      YL++FV++V +
Sbjct: 320 KYCNFIILFYLSVFVILVYY 339


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 450 LAVYRITFATCLFFLLMAL 506
           L+  R+   TCL FLL+AL
Sbjct: 59  LSPMRLIVQTCLDFLLLAL 77


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 491 KEETCCKCNSINSQISNRF 435
           KEE   KC    SQ+SN F
Sbjct: 263 KEELARKCGITVSQVSNWF 281


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -1

Query: 249 MDMLNNIVNKQCCHSNTLAVLQNKGPILHPFLVFISHFVCVDCDV 115
           +D + NI  +Q      L ++  +   L+P +  I   + VDC++
Sbjct: 30  IDNIENITMQQLQEMKYLEMVLKEAQRLYPSVPVIERRLEVDCNI 74


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 134 FVLIVMFVLCTTIYI 90
           FV++ +F+LC + YI
Sbjct: 254 FVIVSVFILCWSPYI 268


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 71  INEQARREREEQERHKQQQQEKQQKIEQQTHSS 103


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 177 GPILHPFLVFISHFVCVDC 121
           G   HP +V +  + CV C
Sbjct: 858 GSEYHPSIVSLGEYKCVTC 876


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 222 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 254


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -3

Query: 292 ISAYIRREEVELVQDGHAEQHSEQAVLPQQHAS 194
           I+   RRE  E  +    +Q  +Q +  Q H+S
Sbjct: 281 INEQARREREEQERHKQQQQEKQQKIEQQTHSS 313


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 119 MFVLCTTIYIPNNKYLYFDIIIRTYKYSDFLYLS 18
           +F + TT+ +    Y  FDI++   K   F  LS
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 119 MFVLCTTIYIPNNKYLYFDIIIRTYKYSDFLYLS 18
           +F + TT+ +    Y  FDI++   K   F  LS
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 119 MFVLCTTIYIPNNKYLYFDIIIRTYKYSDFLYLS 18
           +F + TT+ +    Y  FDI++   K   F  LS
Sbjct: 93  VFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,845
Number of Sequences: 336
Number of extensions: 2774
Number of successful extensions: 21
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)