Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29b02
(555 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein. 25 2.2
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 24 2.9
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 24 3.9
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 24 3.9
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 23 5.1
Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein. 23 6.7
Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein. 23 6.7
Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium... 23 8.9
CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal pe... 23 8.9
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 8.9
>Z22930-5|CAA80517.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 24.6 bits (51), Expect = 2.2
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +3
Query: 288 LMLVLVTIVCCITLAPGL-HNELQKLPFCTNATDSTVTGLLPGNFKVDCDE 437
L+ VLV V C L H +Q LP V + G F++D E
Sbjct: 9 LLAVLVVAVACAQARVALKHRSVQALPRFLPRPQYDVGHRIVGGFEIDVSE 59
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 24.2 bits (50), Expect = 2.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 477 TCLFFLLMALIMIGVKSSKD 536
T + F LM ++MIGV+ S D
Sbjct: 1006 TSILFPLMLVVMIGVRKSLD 1025
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 23.8 bits (49), Expect = 3.9
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 259 LVQDGHAEQHS--EQAVLPQQHASCAAEQRPNTAPIFSFY 146
LVQ G Q++ +QA+ S +RP+T ++ FY
Sbjct: 62 LVQQGFFFQNAFAQQALCAPSRNSMLTGRRPDTVRLYDFY 101
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 23.8 bits (49), Expect = 3.9
Identities = 14/56 (25%), Positives = 23/56 (41%)
Frame = +3
Query: 288 LMLVLVTIVCCITLAPGLHNELQKLPFCTNATDSTVTGLLPGNFKVDCDEAVGYLA 455
L LVLV + C T + L FC+ A S++ + + + + Y A
Sbjct: 147 LNLVLVNVGFCPTFVRNSRTSIIDLTFCSPALASSMNWRVSNAYTLSDHRVIRYTA 202
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 23.4 bits (48), Expect = 5.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -3
Query: 235 QHSEQAVLPQQHASCAAEQRPNT 167
QHS+Q PQQ S Q+P T
Sbjct: 135 QHSQQQQSPQQQQSSQQLQQPLT 157
>Z22930-6|CAA80518.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 23.0 bits (47), Expect = 6.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 267 SSRLMYALMLVLVTIVCCITLAP-GLHNELQKL--PFCTNATDSTVTGLLPGNFKVDCDE 437
S+++ L+ VLV +V C P G H+ + L F + + G F++D +
Sbjct: 2 SNKIAILLLAVLVAVVACAQAQPSGRHHLVHPLLPRFLPRLHRDSNGHRVVGGFQIDVSD 61
Query: 438 A 440
A
Sbjct: 62 A 62
>Z18890-1|CAA79328.1| 277|Anopheles gambiae trypsin protein.
Length = 277
Score = 23.0 bits (47), Expect = 6.7
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 267 SSRLMYALMLVLVTIVCCITLAP-GLHNELQKL--PFCTNATDSTVTGLLPGNFKVDCDE 437
S+++ L+ VLV +V C P G H+ + L F + + G F++D +
Sbjct: 2 SNKIAILLLAVLVAVVACAQAQPSGRHHLVHPLLPRFLPRLHRDSNGHRVVGGFQIDVSD 61
Query: 438 A 440
A
Sbjct: 62 A 62
>Y13592-1|CAA73920.1| 136|Anopheles gambiae voltage-gated sodium
channel protein.
Length = 136
Score = 22.6 bits (46), Expect = 8.9
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = -3
Query: 76 ICILILLYALINIQIF 29
+CI+I ++A++ +Q+F
Sbjct: 22 LCIIIFIFAVMGMQLF 37
>CR954256-8|CAJ14149.1| 247|Anopheles gambiae putative signal
peptidase protein.
Length = 247
Score = 22.6 bits (46), Expect = 8.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = -3
Query: 322 IQHTIVTSTSISAYIRREEVELVQDGH-----AEQHSEQAV 215
+ +T TS+ A E+EL DGH A+QH E V
Sbjct: 103 LSNTYTIYTSVLANDSGSELELDADGHLPRAKAQQHYEAMV 143
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 22.6 bits (46), Expect = 8.9
Identities = 6/16 (37%), Positives = 14/16 (87%)
Frame = -3
Query: 76 ICILILLYALINIQIF 29
+CI+I ++A++ +Q+F
Sbjct: 937 LCIIIFIFAVMGMQLF 952
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,846
Number of Sequences: 2352
Number of extensions: 10445
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -