Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29a23
(486 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.013
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.12
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.37
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 27 1.1
SPAC607.03c |snu13||U3 snoRNP-associated protein Snu13|Schizosac... 27 1.5
SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit L11... 27 1.5
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 27 1.5
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 26 2.6
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 26 2.6
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 26 2.6
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.6
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 3.5
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 26 3.5
SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces po... 25 4.6
SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|... 25 4.6
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 25 4.6
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 25 6.1
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 6.1
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 25 8.0
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 8.0
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 25 8.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 8.0
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 33.9 bits (74), Expect = 0.013
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDH--RSRLTALPGPTARKFTASSRRN 295
S S P+T+ +SS + SS S +S S ++ PT+ T SS +
Sbjct: 236 STSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSS 295
Query: 296 SSSQPTTGSSTL 331
SSS PT+ SST+
Sbjct: 296 SSSSPTSTSSTI 307
Score = 28.3 bits (60), Expect = 0.65
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRN 295
IFS S TP+ T SS + SS+S PA+ T+ PT+ ++T SS +
Sbjct: 86 IFSESATPSETNSYSSPV------SSYSDPATSQLPSS----TSFFSPTSSEYTPSSTES 135
Query: 296 SS-SQPTTGSSTL 331
SS P++ SS +
Sbjct: 136 SSLLDPSSVSSAI 148
Score = 26.6 bits (56), Expect = 2.0
Identities = 18/70 (25%), Positives = 33/70 (47%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S S + ++T+ +SS + +S S ++ S + ++ SS +SS
Sbjct: 221 SPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSS 280
Query: 302 SQPTTGSSTL 331
S PT+ SST+
Sbjct: 281 SSPTSTSSTI 290
Score = 26.2 bits (55), Expect = 2.6
Identities = 25/94 (26%), Positives = 40/94 (42%)
Frame = +2
Query: 80 PATRCEHATF*FIFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP 259
P+T ++ S+S + +T +SS SS S + S ++ P
Sbjct: 241 PSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSP 300
Query: 260 TARKFTASSRRNSSSQPTTGSSTLGVTHLRRGSS 361
T+ T SS SSS ++ SSTL + + SS
Sbjct: 301 TSTSSTISS---SSSSSSSFSSTLSSSSMSSSSS 331
Score = 25.4 bits (53), Expect = 4.6
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Frame = +2
Query: 125 ASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALP-GPTARKFTASSRRNSS 301
+S + +++ P S+ SS S P S S ++ T + SS + S
Sbjct: 274 SSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFS 333
Query: 302 SQPTTGSSTLGVTHLRRGSSA 364
S PT+ SST+ + SS+
Sbjct: 334 SSPTSSSSTISSSSSSPSSSS 354
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 30.7 bits (66), Expect = 0.12
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = +2
Query: 134 TPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT 313
T +T+ S+ I SS S P + + T++P P T+S+ NSS PT
Sbjct: 167 TTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSSPLPT 224
Query: 314 TGSSTLGVTHLRRGSSAHM 370
T +S T + G S+ +
Sbjct: 225 TSTSCTTSTSIPTGGSSSL 243
Score = 25.0 bits (52), Expect = 6.1
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S S T +T+IP SS S P + + T++P P T+S+ NSS
Sbjct: 226 STSCTTSTSIPTGGS-------SSLSTPITPTVPPTSTSSTSIPIPPTS--TSSTDTNSS 276
Query: 302 SQPTTGSS 325
PTT +S
Sbjct: 277 PLPTTSTS 284
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.37
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S+S T TT P+SS SS S +S S ++ ++ ++SS +SS
Sbjct: 145 SSSSTTTTTSPSSS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 196
Query: 302 SQPTTGSSTLGVTHLRRGSSAH 367
S ++ SS+ V SS+H
Sbjct: 197 SSSSSSSSSSSVPITSSTSSSH 218
Score = 25.8 bits (54), Expect = 3.5
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S+S +TT +SS + ++ + P+S S ++ ++ ++SS +SS
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 187
Query: 302 SQPTTGSST 328
S ++ SS+
Sbjct: 188 SSSSSSSSS 196
Score = 25.4 bits (53), Expect = 4.6
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 146 TIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSS 325
T +SS + + SS S P+S S ++ ++ ++SS +SSS ++ SS
Sbjct: 125 TTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 184
Query: 326 TLGVTHLRRGSSA 364
+ + SS+
Sbjct: 185 SSSSSSSSSSSSS 197
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 276 LPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLDSPQASS 431
L H +HR+P+P +R + +L + T+ A K + PQA S
Sbjct: 120 LLRHQQKIHRNPQPRRRRRSTTALPNPSLSNVSVSTTNLASKPVISLPQADS 171
>SPAC607.03c |snu13||U3 snoRNP-associated protein
Snu13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 125
Score = 27.1 bits (57), Expect = 1.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 145 HNPRILADKSTSLTVVPQQASIAASTGPSQPTHRAS 252
H P + DK+ VP +A++ + G S+P AS
Sbjct: 65 HLPLLCEDKNVPYVFVPSKAALGRACGVSRPVISAS 100
>SPAC31A2.03 |mrpl11||mitochondrial ribosomal protein subunit
L11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 27.1 bits (57), Expect = 1.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 237 DSPRFLVLRHANSLPHHAATV 299
+SP FL+L+H N LP A ++
Sbjct: 34 ESPNFLILQHNNLLPREAKSL 54
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 27.1 bits (57), Expect = 1.5
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRN 295
+ S+ T +P S +RH S+ +KPA+ + + LP + + SR N
Sbjct: 96 VVSSKPNQTTAMPPPSNNPSRHVSSTSNKPAA-VSPNPAAHHAELPSGSVPPSASVSRAN 154
Query: 296 SSSQPTTGSSTLGVTHLRRGSSAHM 370
S++ TT GV ++ H+
Sbjct: 155 STA--TTTPHKAGVVSNPAAANVHV 177
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 26.2 bits (55), Expect = 2.6
Identities = 9/43 (20%), Positives = 20/43 (46%)
Frame = +3
Query: 192 PTASQHRSLNRTIAADSPRFLVLRHANSLPHHAATVHRSPRPD 320
P R+ N+ + + P+ + A + HH +++ +PD
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVKKPD 719
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.2 bits (55), Expect = 2.6
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Frame = +2
Query: 122 SASRTPATTIPASSQI-------KARH*QSSH---SKPASQPQQDHRSRLTALPGPTARK 271
S + P+TT+P SS++ + + QSS S S + +++++P T+
Sbjct: 411 STKKIPSTTLPTSSKMITTTTPSVSNNTQSSFLIISTFTSSYEHSEPFKVSSVP-LTSNN 469
Query: 272 FTASSRRNSSSQPTTGSSTLGVTHL 346
F++ S ++SS P T SS L T L
Sbjct: 470 FSSISHSSASSLPITPSSYLSNTTL 494
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 33 LGGRSSLCRISSQTGDLRRDVN-TQPSDSS 119
L G+++ +S+ TGDL++DV QP + S
Sbjct: 3 LFGQATTSTVSNATGDLKKDVEVAQPPEDS 32
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 2.6
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRN 295
I +S T PAS++++ SS S QP S ++P ++ + +S+ +
Sbjct: 427 IIVSSYVSTVTQPASTRVQTTT-VSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPIS 485
Query: 296 SSSQPTTGSSTLGVT 340
SSS ++ STL +
Sbjct: 486 SSSSASSPQSTLSTS 500
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 3.5
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = +2
Query: 152 PASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 331
P+SS + + +S SK QQ H +L K + R + S P + L
Sbjct: 932 PSSSPLSSSSLKSPLSKEGVLNQQGHEQYNFSLSPSIRNKLSPICRPSQGSSPKL-KNNL 990
Query: 332 GVTHLRRGSSAHMD 373
T R GS A +D
Sbjct: 991 SNTEERMGSRALLD 1004
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 25.8 bits (54), Expect = 3.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 174 HVIDSRPTASQHRSLNRTIAADSPRFLVLRHANSLPHHAATVHRSPR 314
H+ D P S R+ +RT++ S +L +RH + H++PR
Sbjct: 230 HMYD--PYTSPLRTPSRTLSRSSSHYLWVRHGKLTRSVSLLQHKTPR 274
>SPBP23A10.11c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 4.6
Identities = 22/86 (25%), Positives = 36/86 (41%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
SA+ + +T IP+S A +S S PAS + T+ + ++ R+S
Sbjct: 212 SATSSVSTVIPSSIISAAPPDSASESTPASTSYASSTTSATSTSTTSGSSGSSDWGRSSF 271
Query: 302 SQPTTGSSTLGVTHLRRGSSAHMDYW 379
+ +G+S V G SA W
Sbjct: 272 YEADSGTSDNIVFLNNMGGSAGSGVW 297
>SPBC28F2.11 |||INO80 complex subunit |Schizosaccharomyces pombe|chr
2|||Manual
Length = 310
Score = 25.4 bits (53), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 188 SSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
+S+ +P SQPQ ++ + P P + K RR SS
Sbjct: 259 TSNVEPVSQPQPS-PDKIVSSPNPPSAKREKKKRRKSS 295
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 4.6
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +2
Query: 134 TPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT 313
T A + A S +H Q + S Q+ H + TA+ PTA S PT
Sbjct: 176 THANPVAAPSTATTQHTQLPKTSAVSH-QKPHEAPSTAVKAPTATVAENEPYPKPQSVPT 234
Query: 314 TGS 322
T S
Sbjct: 235 TTS 237
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 6.1
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 100 RNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 240
R IH+ ++ ++ Y N R + S+ ++ +PQ+ S A+ + QPT
Sbjct: 111 RKRAIHMIKLWHNDYSNVRGMESMSSLVSRLPQRQSSASHS--EQPT 155
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.0 bits (52), Expect = 6.1
Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Frame = +3
Query: 102 QPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHR-----SLNRTIAADSPRFLVLRH 266
Q DS ++ Q P SPHP ++ ASQH S + ++ SP
Sbjct: 88 QQEDSGNSSQS---PTSPHPSNQPAMLSPSTAASQHHHHHSSSSSYAVSPTSPTSPTSSG 144
Query: 267 ANSLPHHAATVHRSPRPDHQRLGSHISGVAALHTWTTGDTHAAFKLSLD 413
+A+ H P + G I +A+ + D L++D
Sbjct: 145 PIGSNFDSASEHNGPVYPQDQQGPVIIPNSAISSTDPDDPETVVSLNVD 193
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 8.0
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 TASQHRS-LNRTIAADSPRFLVLRHANSLPHHAATVHRSP 311
T S+ S LN + ++ +++ + +S HH +H+SP
Sbjct: 31 TFSKRNSILNNQVCFEAIKYIQRHYFSSQSHHVTYLHQSP 70
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 24.6 bits (51), Expect = 8.0
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 250 SWSYGTQIHCLITPQQFIAAHDRIINAWGHTSPAWQLCTHGLLATRT 390
SW Y + L Q F A G +SP QL HG+ A T
Sbjct: 79 SWVYASWAIGLFLYQSFDAIDGSQARRTGTSSPLGQLFDHGVDAINT 125
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 24.6 bits (51), Expect = 8.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 269 KFTASSRRNSSSQPTTGSSTLGVTHL 346
++T S NS QP+ SST GV L
Sbjct: 254 RYTPSENLNSDGQPSYTSSTHGVLML 279
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 24.6 bits (51), Expect = 8.0
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +2
Query: 146 TIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS-SQPTTGS 322
T ASS +S S +S + T PT+ T+SS +SS + +T S
Sbjct: 67 TSSASSSSLTSSSAASSSLTSSSSLASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTS 126
Query: 323 STLGVTHLRRGSSA 364
S+L + + S A
Sbjct: 127 SSLASSSITSSSLA 140
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,985,558
Number of Sequences: 5004
Number of extensions: 40057
Number of successful extensions: 186
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 188065158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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