Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29a23
(486 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 32 0.25
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 32 0.25
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 32 0.25
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 32 0.25
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 0.59
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 31 0.59
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 31 0.59
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 30 0.77
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 30 1.0
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical p... 28 3.1
Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical p... 28 3.1
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 28 3.1
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 28 3.1
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 28 3.1
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 28 3.1
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 28 4.1
U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical p... 28 4.1
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 4.1
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 4.1
U40941-6|AAA81711.2| 435|Caenorhabditis elegans Jnk kinase prot... 28 4.1
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 28 4.1
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 28 4.1
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 28 4.1
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 28 4.1
AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cycl... 28 4.1
AB024086-1|BAA82641.1| 435|Caenorhabditis elegans JKK-1 protein. 28 4.1
Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical p... 27 5.5
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 5.5
AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical ... 27 5.5
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 5.5
AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like ... 27 5.5
Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical pr... 27 7.2
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 7.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 7.2
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 27 7.2
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 27 7.2
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical pr... 27 9.5
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 27 9.5
AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical ... 27 9.5
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 27 9.5
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 27 9.5
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/83 (21%), Positives = 36/83 (43%)
Frame = +2
Query: 113 FIFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRR 292
F + T +T+P+ S + + SS S + P S LT+ P P++ + + +
Sbjct: 450 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 509
Query: 293 NSSSQPTTGSSTLGVTHLRRGSS 361
++ P ST + G++
Sbjct: 510 LTTPSPNPSQSTSSLESSTSGAT 532
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QS-SHSKPA--SQPQQDHRSRLTALPGPTARKFTASS 286
I ++ + AT +P SS QS S S P S S +T +PG + +SS
Sbjct: 268 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSS 327
Query: 287 RRNSSSQPTTGSS 325
SSS +TGS+
Sbjct: 328 PNPSSSPASTGST 340
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/83 (21%), Positives = 36/83 (43%)
Frame = +2
Query: 113 FIFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRR 292
F + T +T+P+ S + + SS S + P S LT+ P P++ + + +
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 293 NSSSQPTTGSSTLGVTHLRRGSS 361
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QS-SHSKPA--SQPQQDHRSRLTALPGPTARKFTASS 286
I ++ + AT +P SS QS S S P S S +T +PG + +SS
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSS 534
Query: 287 RRNSSSQPTTGSS 325
SSS +TGS+
Sbjct: 535 PNPSSSPASTGST 547
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 31.9 bits (69), Expect = 0.25
Identities = 18/83 (21%), Positives = 36/83 (43%)
Frame = +2
Query: 113 FIFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRR 292
F + T +T+P+ S + + SS S + P S LT+ P P++ + + +
Sbjct: 657 FSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMSTLTSEPSPSSTQSSGAQST 716
Query: 293 NSSSQPTTGSSTLGVTHLRRGSS 361
++ P ST + G++
Sbjct: 717 LTTPSPNPSQSTSSLESSTSGAT 739
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QS-SHSKPA--SQPQQDHRSRLTALPGPTARKFTASS 286
I ++ + AT +P SS QS S S P S S +T +PG + +SS
Sbjct: 475 ISGSTGSTATIVPGSSSSVGSSTQSASPSSPGTMSTVSGPTGSTVTVVPGSSTSPAPSSS 534
Query: 287 RRNSSSQPTTGSS 325
SSS +TGS+
Sbjct: 535 PNPSSSPASTGST 547
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 31.9 bits (69), Expect = 0.25
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQ 307
S T + +SSQ+ + S S S +T P P + + TAS + +SS+Q
Sbjct: 682 SSTTSPVASSSSQMTSTQQPSGSSSSIGSTVNQGSSSVTTQP-PASSRSTAS-QGSSSAQ 739
Query: 308 PTTGSSTLGVT 340
P SST+G T
Sbjct: 740 PIASSSTMGST 750
Score = 31.1 bits (67), Expect = 0.44
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTA-SSRRNSSS 304
S + T PASS+ A SS ++P + + ++ P PTA + SS +SS
Sbjct: 716 SSSVTTQPPASSRSTASQ-GSSSAQPIASSSTMGSTAGSSSPQPTASSTSVPSSTGATSS 774
Query: 305 QPTTGSSTLGVTHLRRGSS 361
T GSST+G T SS
Sbjct: 775 GSTVGSSTMGSTQSSLPSS 793
Score = 29.1 bits (62), Expect = 1.8
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +2
Query: 197 SKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT---TGSSTLGVTHLRRGSS 361
S AS Q S TA PG + T +S + SSS T TGS+T+ T + +GSS
Sbjct: 925 STSASSSTQPIASSTTANPGSSTSGPTIASTQGSSSTQTNSNTGSTTVATT-VTQGSS 981
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 30.7 bits (66), Expect = 0.59
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 260 TARKFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQPRL 415
T R+F +R S++ T+ + T VT RR SSAH H++ A+P +
Sbjct: 232 TRRRFADLRKRVSTTTKTSVTETENVTTTRRSSSAHS---THSKRSSAKPEV 280
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 30.7 bits (66), Expect = 0.59
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 260 TARKFTASSRRNSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSIQAQPRL 415
T R+F +R S++ T+ + T VT RR SSAH H++ A+P +
Sbjct: 232 TRRRFADLRKRVSTTTKTSVTETENVTTTRRSSSAHS---THSKRSSAKPEV 280
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 193 PQQASIAASTGPSQPTHRASWSYGTQIHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 366
P + +ST S P +S +YG+ I P F + ++WG T P L T
Sbjct: 15 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 72
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 30.7 bits (66), Expect = 0.59
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 193 PQQASIAASTGPSQPTHRASWSYGTQIHCLITPQQFIAAHDRIINAWGHTSPAWQLCT 366
P + +ST S P +S +YG+ I P F + ++WG T P L T
Sbjct: 120 PSSPASTSSTAYSPPPATSSTTYGSSIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPT 177
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 30.3 bits (65), Expect = 0.77
Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Frame = +2
Query: 80 PATRCEHATF*FIFSASRTPATTIPASSQIKARH*QSSHS-KPASQPQQDHRSRLTALPG 256
P TRC T T P+SS I + Q S S +P + + ++ P
Sbjct: 1450 PTTRCPGTQGTTQPGTIGTTVTVPPSSSSIGSTAPQGSSSIQPIASSSTMGSTAGSSSPQ 1509
Query: 257 PTARKFTASSRR---NSSSQPTTGSSTLGVTHLRRGSS 361
PT + S +S S T GSST+G T SS
Sbjct: 1510 PTVSSTSVPSSTGATSSGSSTTVGSSTVGATQTSVSSS 1547
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S+S +TI S+Q S+ P++ +S +TA P T TAS +S
Sbjct: 474 SSSTVVTSTITPSTQGVPTS-TSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTITS 532
Query: 302 SQPTTGS 322
S PT+ S
Sbjct: 533 SAPTSQS 539
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQ 307
S +PA PA A S + PQQ + T L FTA S NS++
Sbjct: 21 SNSPALACPAPIFAPAPQRASPWPAALASPQQTTFTSPTGLSSSGPSAFTAVSPTNSANS 80
Query: 308 PTTGSSTL 331
TT ++T+
Sbjct: 81 LTTSTATI 88
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQ 307
S +PA PA A S + PQQ + T L FTA S NS++
Sbjct: 21 SNSPALACPAPIFAPAPQRASPWPAALASPQQTTFTSPTGLSSSGPSAFTAVSPTNSANS 80
Query: 308 PTTGSSTL 331
TT ++T+
Sbjct: 81 LTTSTATI 88
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Frame = +3
Query: 18 SKYHPLGGRSS--LCRISSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPR-R*KHVIDS 188
S Y+P +SS L + S R + S + ++ HP+ + ++ + S
Sbjct: 191 SNYNPASQKSSPPLSKYSQNNQGQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTS 250
Query: 189 RPTASQHRSLNRTIAADSPRFLVL-RHANSLPHHAATVHRSPRPDHQRLGS 338
P S H +++ + V+ H + LPHH + + RLG+
Sbjct: 251 SPPVSMHSPVSQDFKSTIINGHVMGAHHHHLPHHTRFLQHQQSAPNLRLGT 301
>Z72507-13|CAH60789.1| 515|Caenorhabditis elegans Hypothetical
protein F17C11.7b protein.
Length = 515
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 LPKLVTCDEM*TRNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAAST---GPSQ 234
L KL+ C E LL H ++ NS YH+ ++ ++ + + S PSQ
Sbjct: 163 LRKLLACKENGISTLL-HPSKLYNSVYHSSHLVVEQQCDKDQCNSKMEVGVSVVMRNPSQ 221
Query: 235 PTHRASWS 258
T R WS
Sbjct: 222 KTQR-HWS 228
>Z72507-10|CAA96629.1| 531|Caenorhabditis elegans Hypothetical
protein F17C11.7a protein.
Length = 531
Score = 28.3 bits (60), Expect = 3.1
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 64 LPKLVTCDEM*TRNLLIHLQRIKNSGYHNPRILADKSTSLTVVPQQASIAAST---GPSQ 234
L KL+ C E LL H ++ NS YH+ ++ ++ + + S PSQ
Sbjct: 179 LRKLLACKENGISTLL-HPSKLYNSVYHSSHLVVEQQCDKDQCNSKMEVGVSVVMRNPSQ 237
Query: 235 PTHRASWS 258
T R WS
Sbjct: 238 KTQR-HWS 244
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 28.3 bits (60), Expect = 3.1
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 4/111 (3%)
Frame = +3
Query: 18 SKYHPLGGRSS--LCRISSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPR-R*KHVIDS 188
S Y+P +SS L + S R + S + ++ HP+ + ++ + S
Sbjct: 191 SNYNPASQKSSPPLSKYSQNNQGQRNSPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTS 250
Query: 189 RPTASQHRSLNRTIAADSPRFLVL-RHANSLPHHAATVHRSPRPDHQRLGS 338
P S H +++ + V+ H + LPHH + + RLG+
Sbjct: 251 SPPVSMHSPVSQDFKSTIINGHVMGAHHHHLPHHTRFLQHQQSAPNLRLGT 301
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/91 (25%), Positives = 33/91 (36%)
Frame = +3
Query: 63 SSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHRSLNRTIAADS 242
SS RR+ + SS H+E R + R H R + R + AA
Sbjct: 223 SSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAP 282
Query: 243 PRFLVLRHANSLPHHAATVHRSPRPDHQRLG 335
P ++ H AA R+P P + G
Sbjct: 283 PPPPSSSSSSKRSHEAAARIRAPSPPRRSFG 313
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/91 (25%), Positives = 33/91 (36%)
Frame = +3
Query: 63 SSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHRSLNRTIAADS 242
SS RR+ + SS H+E R + R H R + R + AA
Sbjct: 358 SSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAP 417
Query: 243 PRFLVLRHANSLPHHAATVHRSPRPDHQRLG 335
P ++ H AA R+P P + G
Sbjct: 418 PPPPSSSSSSKRSHEAAARIRAPSPPRRSFG 448
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 28.3 bits (60), Expect = 3.1
Identities = 23/91 (25%), Positives = 33/91 (36%)
Frame = +3
Query: 63 SSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHRSLNRTIAADS 242
SS RR+ + SS H+E R + R H R + R + AA
Sbjct: 403 SSSNSHRRREDDKDRRQSSDHHKERRRSPATRQRATDHKESRRSEGTSTRVESAASAAAP 462
Query: 243 PRFLVLRHANSLPHHAATVHRSPRPDHQRLG 335
P ++ H AA R+P P + G
Sbjct: 463 PPPPSSSSSSKRSHEAAARIRAPSPPRRSFG 493
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical protein
Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 42 RSSLCRISSQTGDLRRDVNTQPSDSSSAHQELRL---PQSPHPRR*KHVIDSRPTASQHR 212
R+S+ + ++T ++D D S + +EL + PQ+P RR +++ TA + R
Sbjct: 805 RTSMEEVVAKTE--KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRR 862
Query: 213 SLNRTIAADSPR 248
+ A++ PR
Sbjct: 863 KGRKLEASEDPR 874
>U80839-15|AAB37911.1| 430|Caenorhabditis elegans Hypothetical
protein ZC204.2 protein.
Length = 430
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 54 CRISSQTGDLRRDVNTQPSDSSSAHQELRLPQSPHPR 164
C +S+QTG + PS+S+ + L S PR
Sbjct: 144 CHVSAQTGSCESSKSNSPSESTKSMGSAVLSSSTEPR 180
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 450 ACKGQCCSKPAVSRG*A*MLRACRQ*SMCAELPRRRCVTPSVDDPVVGCDELLRR 286
+C+ QC S PAVS+ + C+ S C + T + PVV C + ++
Sbjct: 87 SCRQQCQSAPAVSQCQPMCQQQCQ--SQCTPMYNPPATTTTTPAPVVQCQPMCQQ 139
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 4.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 450 ACKGQCCSKPAVSRG*A*MLRACRQ*SMCAELPRRRCVTPSVDDPVVGCDELLRR 286
+C+ QC S PAVS+ + C+ S C + T + PVV C + ++
Sbjct: 87 SCRQQCQSAPAVSQCQPMCQQQCQ--SQCTPMYNPPATTTTTPAPVVQCQPMCQQ 139
>U40941-6|AAA81711.2| 435|Caenorhabditis elegans Jnk kinase protein
1 protein.
Length = 435
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 158 SSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 331
S+ + +H + S + +S PQ + + L P RKFT S + S S+ T L
Sbjct: 39 STSVDQKHKECSST--SSSPQHQRPNNIGYLTSPMERKFTPLSMKPSPSRRDTEKDAL 94
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 27.9 bits (59), Expect = 4.1
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 42 RSSLCRISSQTGDLRRDVNTQPSDSSSAHQELRL---PQSPHPRR*KHVIDSRPTASQHR 212
R+S+ + ++T ++D D S + +EL + PQ+P RR +++ TA + R
Sbjct: 805 RTSMEEVVAKTE--KKDQPEASEDLSDSREELSVAAGPQAPKKRRRGRMMEDPETARKRR 862
Query: 213 SLNRTIAADSPR 248
+ A++ PR
Sbjct: 863 KGRKLEASEDPR 874
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGP 259
+ +AS + +P SS+ ++ Q+S +++ +DHR+ L LP P
Sbjct: 357 VLNASNAKSFVMPLSSRGVSQGPQASRDFRSARAPRDHRASLHELPRP 404
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 188 SSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT 313
+S P+ P R ++ PGP+ SS+ N S PT
Sbjct: 690 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 731
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +2
Query: 188 SSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPT 313
+S P+ P R ++ PGP+ SS+ N S PT
Sbjct: 926 NSDRSPSRTPSPASSPRASSSPGPSRDDEVTSSQNNKESSPT 967
>AF003135-9|AAK18985.3| 1146|Caenorhabditis elegans Guanylyl cyclase
protein 17 protein.
Length = 1146
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 179 H*QSSHSKPASQPQQDHRSRLTALPGP-TARKFTASSRRNSS 301
H ++SH KP S+ + S+ + GP T+ K T SR ++
Sbjct: 476 HVEASHLKPISKKSKSEASQRSFASGPSTSTKLTVESRTETT 517
>AB024086-1|BAA82641.1| 435|Caenorhabditis elegans JKK-1 protein.
Length = 435
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 158 SSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTL 331
S+ + +H + S + +S PQ + + L P RKFT S + S S+ T L
Sbjct: 39 STSVDQKHKECSST--SSSPQHQRPNNIGYLTSPMERKFTPLSMKPSPSRRDTEKDAL 94
>Z81048-1|CAB02839.1| 587|Caenorhabditis elegans Hypothetical
protein C41G7.2 protein.
Length = 587
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQ 307
S T ++P S + A+ SSHS+PA Q + LTA T+R+ S+Q
Sbjct: 67 SATGRASLPERSAM-AKTSTSSHSRPALQSTASRNTTLTA--ASTSRQLRTGRPPPPSTQ 123
Query: 308 PTTGSSTL 331
+T + +L
Sbjct: 124 RSTATFSL 131
>Z48621-12|CAA88545.2| 425|Caenorhabditis elegans Hypothetical
protein R07B1.8 protein.
Length = 425
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 118 LQRIKNSGYHNPRILADKSTSLTVVPQQASIAASTGPSQPT 240
LQ +K+ H P ++ + S+SL P A I P+Q T
Sbjct: 282 LQCVKSKSPHIPAMVIEMSSSLDEEPTSAKIQEQVTPAQLT 322
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.5
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S+S + T P S++ S+ + P+S + T+ GP++ T SS SS
Sbjct: 465 SSSSSTTVTTPTSTE-------STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SS 516
Query: 302 SQPTTGSSTLGVTHLRRGSS 361
S +T SST T ++ S+
Sbjct: 517 SVSSTASSTQSSTSTQQSST 536
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.5 bits (58), Expect = 5.5
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 122 SASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSS 301
S+S + T P S++ S+ + P+S + T+ GP++ T SS SS
Sbjct: 465 SSSSSTTVTTPTSTE-------STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTA-SS 516
Query: 302 SQPTTGSSTLGVTHLRRGSS 361
S +T SST T ++ S+
Sbjct: 517 SVSSTASSTQSSTSTQQSST 536
>AL132904-3|CAB60972.1| 718|Caenorhabditis elegans Hypothetical
protein Y111B2A.3 protein.
Length = 718
Score = 27.5 bits (58), Expect = 5.5
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2
Query: 209 SQPQQDHRSRLTALPGPTARKFTASSRRNSSSQPTTGSSTLG 334
S+ DH +R A PG R F SR NSS+ GSST G
Sbjct: 678 SERNMDHWTR-PASPGN--RPFFGGSRMNSSTSRAHGSSTNG 716
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 5.5
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 115 HLQRIKNSGYHNPRILADKS 174
H QRI+NSGY +L +KS
Sbjct: 355 HFQRIQNSGYWRSYVLKEKS 374
>AB033380-1|BAA92264.1| 587|Caenorhabditis elegans kinesin like
protein protein.
Length = 587
Score = 27.5 bits (58), Expect = 5.5
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +2
Query: 128 SRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQ 307
S T ++P S + A+ SSHS+PA Q + LTA T+R+ S+Q
Sbjct: 67 SATGRASLPERSAM-AKTSTSSHSRPALQSTASRNTTLTA--ASTSRQLRTGRPPPPSTQ 123
Query: 308 PTTGSSTL 331
+T + +L
Sbjct: 124 RSTATFSL 131
>Z70780-7|CAA94824.1| 411|Caenorhabditis elegans Hypothetical
protein F46B6.8 protein.
Length = 411
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Frame = +1
Query: 253 WSYGTQIHCLITPQQFIAAHDRIINAWGHTSPAWQ-------LCTHGLLA 381
W Y ++H + T +I RI +G TS W L HGLLA
Sbjct: 42 WGYKAEVHTVTTEDGYILQMQRI--PYGKTSVTWPNGKRPVILLQHGLLA 89
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 90 DVNTQPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHR 212
DV P+ SS A E +P+SPH H++++ T + R
Sbjct: 2543 DVPHSPAPSSHAESEQPVPESPH-----HIVETTTTTTVTR 2578
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 90 DVNTQPSDSSSAHQELRLPQSPHPRR*KHVIDSRPTASQHR 212
DV P+ SS A E +P+SPH H++++ T + R
Sbjct: 2543 DVPHSPAPSSHAESEQPVPESPH-----HIVETTTTTTVTR 2578
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.1 bits (57), Expect = 7.2
Identities = 24/95 (25%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Frame = +2
Query: 116 IFSASRTPATTIPASSQIKARH*QSSHSKPASQPQQDHRSRLTALPGPTARKF-TASSRR 292
I+ TP TTI SS + + +KP +QP +D T P K T
Sbjct: 492 IYKGEDTPTTTIGYSSSVVYTTTEQPATKPYTQPPRDTERPSTIYGRPIYTKAPTTVGYE 551
Query: 293 NSSSQPTTGSSTLGVTHLRRGSSAHMDYWRHARSI 397
+ TT + L S H+ HA +
Sbjct: 552 QPKATYTTQAPVTTTIALDDFSCKHLADGNHASGL 586
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 174 HVIDSRPTASQHRSLNRTIAADSPRFLVLRH 266
+++D R T H ++ R D+P+F LR+
Sbjct: 515 YMVDGRLTVEAHVNITRVTCLDAPKFKKLRN 545
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +3
Query: 357 ALHTWTTGDT--HAAFKLSLDSPQASSSTGP 443
A +TWT GDT + FK D P + GP
Sbjct: 195 ATYTWTDGDTTGNGGFKWGRDEPDNLNWPGP 225
>Z78200-3|CAB01580.1| 144|Caenorhabditis elegans Hypothetical
protein T04H1.3 protein.
Length = 144
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 165 CEDAGIVVAGVLDALKMNQKVACSHLVAGHQFGKIYDKGKIF 40
C DA + V G ++ + K+ C A K+YD G I+
Sbjct: 17 CSDALLNVIGSTQSVTVTGKLVCEGQPASGVLVKMYDDGTIY 58
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 114 SSSAHQELRLPQSPHPRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHANSLP 281
S++ + R SP PRR + + P A+ H N I+ + RFL + P
Sbjct: 8 SAAGRRFSRCAPSPRPRRNYALANIPPPAAVHIRTNDMISPEERRFLEAAELGNKP 63
>AL117204-8|CAB55123.1| 205|Caenorhabditis elegans Hypothetical
protein Y116A8C.17 protein.
Length = 205
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 272 FTASSRRNSSSQPTTGSSTLGVTHLRRGSSAH 367
F A+S ++ SSQ +TGSS L+ SAH
Sbjct: 30 FPANSTQSLSSQSSTGSSDQHSVILQENESAH 61
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 26.6 bits (56), Expect = 9.5
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 114 SSSAHQELRLPQSPHPRR*KHVIDSRPTASQHRSLNRTIAADSPRFLVLRHANSLP 281
S++ + R SP PRR + + P A+ H N I+ + RFL + P
Sbjct: 8 SAAGRRFSRCAPSPRPRRNYALANIPPPAAVHIRTNDMISPEERRFLEAAELGNKP 63
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 26.6 bits (56), Expect = 9.5
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 137 PATTIPASSQIKARH*QSSHS--KPASQPQQDHRSRLTALPGPTARKFTASSRRNSSSQP 310
P TT P ++ +K HS + A+ P Q+ + +T T+ + ++ +SS P
Sbjct: 162 PTTTTPTTT-LKPTTSPEKHSTTEEATSPSQNETTSVTTQNPTTSNQKNETTDEATSSPP 220
Query: 311 TTGSST 328
TT + T
Sbjct: 221 TTTTPT 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,466,315
Number of Sequences: 27780
Number of extensions: 251562
Number of successful extensions: 1048
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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