Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29a07
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 272 2e-73
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 272 2e-73
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 267 6e-72
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 219 1e-57
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 40 0.001
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 31 0.57
Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical ... 29 4.0
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical p... 27 9.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 9.3
AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical ... 27 9.3
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 272 bits (667), Expect = 2e-73
Identities = 124/187 (66%), Positives = 139/187 (74%)
Frame = +1
Query: 118 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 297
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 298 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 477
+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122
Query: 478 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 657
G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182
Query: 658 YGAALNT 678
YGA LNT
Sbjct: 183 YGAVLNT 189
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 272 bits (667), Expect = 2e-73
Identities = 124/187 (66%), Positives = 139/187 (74%)
Frame = +1
Query: 118 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 297
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVKI T VCHTDAYTL G DPEG
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62
Query: 298 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 477
+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +QG
Sbjct: 63 LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122
Query: 478 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 657
G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182
Query: 658 YGAALNT 678
YGA LNT
Sbjct: 183 YGAVLNT 189
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 267 bits (654), Expect = 6e-72
Identities = 124/189 (65%), Positives = 139/189 (73%), Gaps = 2/189 (1%)
Frame = +1
Query: 118 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 291
ST G+VI C AAVAW A PLSIE I+V PPKA EVRVK I T VCHTDAYTL G DP
Sbjct: 3 STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62
Query: 292 EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRST 471
EG+FPVVL T PGDHVVPLYVPQC C++C NPKTNLCQK+R +
Sbjct: 63 EGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRIS 122
Query: 472 QGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVP 651
QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV APL+KV LLGCG+
Sbjct: 123 QGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGIS 182
Query: 652 TGYGAALNT 678
TGYGA LNT
Sbjct: 183 TGYGAVLNT 191
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 219 bits (535), Expect = 1e-57
Identities = 96/148 (64%), Positives = 109/148 (73%)
Frame = +1
Query: 235 ITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCN 414
I T VCHTDAYTL G DPEG+FPVVL T PGDHVVPLYVPQC
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274
Query: 415 TCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLC 594
C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLC
Sbjct: 275 ECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLC 334
Query: 595 KVAEAAPLDKVCLLGCGVPTGYGAALNT 678
KV APL+KV LLGCG+ TGYGA LNT
Sbjct: 335 KVNPQAPLEKVSLLGCGISTGYGAVLNT 362
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 137 LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALR 235
+ A P S G Q +R KW +KP K AL+
Sbjct: 181 IPARPPSPGAQKLHSRLKRSKWLHRKPTKFALK 213
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Frame = +1
Query: 169 GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLXXXXXXXXXX 345
G PL + ++ V P+ E+ VKI +G+CH+D +T G + + P++
Sbjct: 19 GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVT 78
Query: 346 XXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGT 501
GD + L C C++C LC + Q G+ GT
Sbjct: 79 IGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI---QNYGIDRHGT 128
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
Frame = +1
Query: 175 PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLXXXXXXXXXXX 348
PL + ++ V P E+ VKI +G+CH+D + G KD V P+V
Sbjct: 20 PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSVVQI 78
Query: 349 XXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRS 468
T + GD V L C C+FC LC +++
Sbjct: 79 GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQN 119
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +1
Query: 133 VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 306
V K A+ +E+ G PL I+++ + P E+ VK+ +G+CH+D +T G P
Sbjct: 6 VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65
Query: 307 VVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKV 462
++ + + GD V + L C C++C LC V
Sbjct: 66 MIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHV 118
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 178 LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLXXXXXXXXXXX 348
L +E++ + P +V VK+ G+C +D +T P V P+++
Sbjct: 16 LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75
Query: 349 XXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 465
+K GD + C C+ C + NLC ++R
Sbjct: 76 GNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMR 114
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 35.9 bits (79), Expect = 0.027
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = +1
Query: 178 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLXXXXXXXXXX 345
L +E+ + P +V VKI G+C +D + L+ G F P+VL
Sbjct: 16 LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVVSE 74
Query: 346 XXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 465
K GD + C C+ C + NLC +R
Sbjct: 75 IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMR 114
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 145 LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 270
L A+ + + PL E I DP + +++T T VC DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325
>Z83119-4|CAE17866.1| 226|Caenorhabditis elegans Hypothetical
protein R05H10.7 protein.
Length = 226
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/71 (21%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +1
Query: 70 TIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITAT 246
++++ + S+ V + G+++ CL AW+ + + EVD + I
Sbjct: 49 SLVARCLQFPFSTVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKML 108
Query: 247 GVCHTDAYTLS 279
CH D + L+
Sbjct: 109 NTCHEDFWNLA 119
>AL117207-8|CAB60399.1| 362|Caenorhabditis elegans Hypothetical
protein Y60A3A.14 protein.
Length = 362
Score = 28.7 bits (61), Expect = 4.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2
Query: 534 VEFLSFTAESPSAIWHHTLTL 472
V+ F+AE+ + WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 148 AAVAWEAGKPLSIEEIEVDPPK--AGEVRVKITATGVCHTDAYTLSGK 285
AAV G P IE +E D P+ +V V+ A GV D Y +G+
Sbjct: 12 AAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQ 59
>Z68337-10|CAA92753.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +1
Query: 37 CYIIE*ALHSSTIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKA 216
C+II +L S+ I W L SA S G AV WE ++ I VD K
Sbjct: 234 CHII--SLRSADSIGIKYTWTLPSAECSADGAQNAVPKAVGWERNANDKLQPISVDLSKE 291
Query: 217 GEVRV 231
+ ++
Sbjct: 292 FDPKI 296
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/65 (30%), Positives = 30/65 (46%)
Frame = -3
Query: 305 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 126
G++ G+ SV +S + T T+P+ STS SS +P+S A + P
Sbjct: 1533 GSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSSSTQSIPSSTAANTGSSTSGP 1592
Query: 125 TVDMT 111
TV T
Sbjct: 1593 TVATT 1597
>AL032641-8|CAA21650.1| 647|Caenorhabditis elegans Hypothetical
protein M7.5 protein.
Length = 647
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +1
Query: 37 CYIIE*ALHSSTIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKA 216
C+II +L S+ I W L SA S G AV WE ++ I VD K
Sbjct: 234 CHII--SLRSADSIGIKYTWTLPSAECSADGAQNAVPKAVGWERNANDKLQPISVDLSKE 291
Query: 217 GEVRV 231
+ ++
Sbjct: 292 FDPKI 296
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,968,410
Number of Sequences: 27780
Number of extensions: 337753
Number of successful extensions: 831
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 828
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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