Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29a06
(284 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38... 124 4e-28
UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|R... 35 0.40
UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide polyme... 34 0.70
UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1; Te... 33 1.2
UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2... 33 1.2
UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7... 33 1.2
UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus Carson... 33 1.6
UniRef50_Q7PDU3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=... 33 1.6
UniRef50_Q24DS3 Cluster: Cation channel family protein; n=1; Tet... 33 1.6
UniRef50_O61610 Cluster: PaxC transcription factor; n=6; Anthozo... 33 1.6
UniRef50_P0A2N2 Cluster: Virulence protein vsdE; n=14; Salmonell... 33 1.6
UniRef50_A6LE35 Cluster: Capsular polysaccharide repeat unit tra... 32 2.1
UniRef50_Q8IKM7 Cluster: Putative uncharacterized protein; n=1; ... 32 2.8
UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo... 32 2.8
UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:... 32 2.8
UniRef50_A4QZ86 Cluster: Predicted protein; n=1; Magnaporthe gri... 32 2.8
UniRef50_Q9U8G1 Cluster: Erythrocyte membrane protein 3; n=4; Pl... 31 4.9
UniRef50_Q245L6 Cluster: DUTP diphosphatase; n=1; Tetrahymena th... 31 4.9
UniRef50_A2EDE6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q8I2S4 Cluster: NADPH-cytochrome p450 reductase; n=2; P... 31 6.5
UniRef50_Q7RD79 Cluster: Protein kinase domain, putative; n=9; P... 31 6.5
UniRef50_Q4XJ05 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q4X6V3 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_Q4UIL1 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_Q5UWB4 Cluster: Putative uncharacterized protein; n=1; ... 31 6.5
UniRef50_UPI00006CF259 Cluster: cyclic nucleotide-binding domain... 30 8.6
UniRef50_Q237T2 Cluster: ABC transporter family protein; n=1; Te... 30 8.6
UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2; ... 30 8.6
UniRef50_A6UX42 Cluster: PUA domain containing protein; n=1; Met... 30 8.6
>UniRef50_P41709 Cluster: Uncharacterized 9.4 kDa protein in PE38
3'region; n=5; Nucleopolyhedrovirus|Rep: Uncharacterized
9.4 kDa protein in PE38 3'region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 81
Score = 124 bits (299), Expect = 4e-28
Identities = 62/77 (80%), Positives = 65/77 (84%), Gaps = 5/77 (6%)
Frame = -1
Query: 284 DSSNCIKIDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHE--QVDETNKQ 111
DSSNCIKIDVKY MPLHYQ D NADK+VVNAYD IDVDPNK+FIINHNHE QV+ETNKQ
Sbjct: 2 DSSNCIKIDVKYDMPLHYQCDNNADKDVVNAYDTIDVDPNKRFIINHNHEQQQVNETNKQ 61
Query: 110 EVVDKT---DATTYNSC 69
VVDKT D TYNSC
Sbjct: 62 -VVDKTFINDTATYNSC 77
>UniRef50_A6M2H9 Cluster: Diguanylate cyclase; n=2; Clostridium|Rep:
Diguanylate cyclase - Clostridium beijerinckii NCIMB
8052
Length = 356
Score = 34.7 bits (76), Expect = 0.40
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 51 HLNFYDARIVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVXL 230
H D RI+ ++ I FI +F+I++ F G+N S+I N+FI + +
Sbjct: 60 HNTIIDFRIIPVIITSIYGGFISTFISVFIIILFRLTFFGINYSSLITSGNLFILLIIFT 119
Query: 231 IM*RHMV 251
I+ R+ +
Sbjct: 120 IISRYKI 126
>UniRef50_Q64WD5 Cluster: Putative capsular polysaccharide
polymerase; n=1; Bacteroides fragilis|Rep: Putative
capsular polysaccharide polymerase - Bacteroides
fragilis
Length = 345
Score = 33.9 bits (74), Expect = 0.70
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 48 YHLNFYDARIVCCCVSFIDD-FLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNV 206
Y L ++ I C S + F +C LF I ++++VGV+ + ++IYN+
Sbjct: 4 YFLIYFFLLIFCSLGSVTKNRFFLICVFILFSIFSGFRYYVGVDYVNYVKIYNL 57
>UniRef50_Q237T3 Cluster: ABC transporter family protein; n=1;
Tetrahymena thermophila SB210|Rep: ABC transporter family
protein - Tetrahymena thermophila SB210
Length = 1428
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/37 (37%), Positives = 26/37 (70%)
Frame = +3
Query: 93 SFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYN 203
SF D FLF+ + LF+++++ F+V V++ S R++N
Sbjct: 891 SFKDTFLFLTMLQLFLMILSSVFYVLVSLLSCYRLFN 927
>UniRef50_Q59KG1 Cluster: Potential M1 family aminopeptidase; n=2;
Candida albicans|Rep: Potential M1 family aminopeptidase
- Candida albicans (Yeast)
Length = 459
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -1
Query: 236 HYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTD 90
HY+ DIN K N I +D N I+H ++Q E KQE +K +
Sbjct: 20 HYKLDINHQKPNFNGVAIITIDKNHHQQISHKYKQ-SEKEKQEKEEKEE 67
>UniRef50_Q09103 Cluster: Eye-specific diacylglycerol kinase; n=7;
Eumetazoa|Rep: Eye-specific diacylglycerol kinase -
Drosophila melanogaster (Fruit fly)
Length = 1457
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 221 INADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDA 87
+ A + ++ +AI V+P + N +HE+VD +N + VD D+
Sbjct: 406 VRARRRSISRQEAIFVEPTGNSLENVSHEEVDNSNTKSSVDTADS 450
>UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus
Carsonella ruddii PV|Rep: Putative GTPase - Carsonella
ruddii (strain PV)
Length = 254
Score = 32.7 bits (71), Expect = 1.6
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +3
Query: 108 FLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVXLIM*RHMVFYIYF 266
F++ FI FV+ IN I+ + +IY + I +N+ I+ + + FY YF
Sbjct: 141 FVYKFFIKSFVLNINSNNLDVFKINFISKIYLIIINLNIIHILIKIIKFYFYF 193
>UniRef50_Q7PDU3 Cluster: ERYTHROCYTE MEMBRANE PROTEIN PFEMP3; n=1;
Plasmodium yoelii yoelii|Rep: ERYTHROCYTE MEMBRANE
PROTEIN PFEMP3 - Plasmodium yoelii yoelii
Length = 918
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -1
Query: 212 DKNVVNAYDAIDVDPNKKFIIN-HNHEQVDETNKQEVVDKTD 90
+K ++N Y+ I D N++ I+N HN + DE N ++++ ++
Sbjct: 17 EKEIINIYNDIKDDENQREIVNIHNDIKEDENNNVDIINLSE 58
>UniRef50_Q24DS3 Cluster: Cation channel family protein; n=1;
Tetrahymena thermophila SB210|Rep: Cation channel family
protein - Tetrahymena thermophila SB210
Length = 1367
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 102 DDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNV 224
D FL + I LF +++N + F G+NI + +YNV I ++
Sbjct: 199 DSFLSL-LIMLFTLLLNLQLFFGMNISNFYLLYNVLIIFSI 238
>UniRef50_O61610 Cluster: PaxC transcription factor; n=6;
Anthozoa|Rep: PaxC transcription factor - Acropora
millepora (Coral)
Length = 464
Score = 32.7 bits (71), Expect = 1.6
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = -1
Query: 212 DKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTYNS 72
+ + +DA D D N++ INH++E VD T+++ + + + + YNS
Sbjct: 260 ETEAIQEFDAEDRDSNQRSNINHSNENVD-TDRKAMKNNSGNSGYNS 305
>UniRef50_P0A2N2 Cluster: Virulence protein vsdE; n=14;
Salmonella|Rep: Virulence protein vsdE - Salmonella
typhimurium
Length = 216
Score = 32.7 bits (71), Expect = 1.6
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = -1
Query: 281 SSNCIKIDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVV 102
S NC+ + H +H++ DI + KN + +D K I H Q N + V
Sbjct: 70 SGNCVLLSACLHYNIHHRQDILSSKNTASPTVGLDSAIVDKIIFGHELNQSYCLNSIDEV 129
Query: 101 DKTDATTYN 75
+K Y+
Sbjct: 130 EKEILNRYD 138
>UniRef50_A6LE35 Cluster: Capsular polysaccharide repeat unit
transporter; n=1; Parabacteroides distasonis ATCC
8503|Rep: Capsular polysaccharide repeat unit
transporter - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 486
Score = 32.3 bits (70), Expect = 2.1
Identities = 12/74 (16%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +3
Query: 75 IVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNV----XLIM*R 242
++C + +++C D+ +++ K+ + I +I ++++ +C+ V +
Sbjct: 294 VICFLTFLMSGVMYICASDIILLLYGDKWVDAIEIFKIIGLFSISLCLPVVFDTVMTATN 353
Query: 243 HMVFYIYFNTITTI 284
M Y++ N ++ I
Sbjct: 354 RMTLYLWINIVSNI 367
>UniRef50_Q8IKM7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1632
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = -1
Query: 269 IKIDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEV 105
+ ID + Y+ +I+ +KNV N I++ K I+HN E++D+TN Q++
Sbjct: 387 MNIDTNNQISNTYENNISFNKNVEND-KVINIYQTK---ISHNQEEMDKTNNQQM 437
>UniRef50_O63545 Cluster: NADH dehydrogenase subunit 5; n=1; Bodo
saltans|Rep: NADH dehydrogenase subunit 5 - Bodo saltans
Length = 212
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Frame = +3
Query: 24 CHCYFKL*YHLNFYDARIVCCCVSFIDDFLFVCFIDL-FVIMINYK--FFVGVNIDSVIR 194
C +F L F+ + C DF+F+C + F + Y FF N+D V
Sbjct: 96 CLDFFLYFVFLGFFYFLMYCLFFFSFFDFVFLCVVFCCFFVFCFYGCLFFYFFNLDCVYL 155
Query: 195 IYNVFICVNVXLIM*RHMVFYI 260
+ F+C V M VF++
Sbjct: 156 CWRFFLCCFVFFFMLLFFVFWV 177
>UniRef50_A0NG98 Cluster: ENSANGP00000030067; n=2; Eumetazoa|Rep:
ENSANGP00000030067 - Anopheles gambiae str. PEST
Length = 136
Score = 31.9 bits (69), Expect = 2.8
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +3
Query: 48 YHLNFYDARIVCCCVSFIDDFLFVC-FIDLFVIMINYKFF-VGVNIDSVIRIYNVFICVN 221
YH N+ +IVC V +LF+C F+ LF+ + Y F + V + + +Y +FIC+
Sbjct: 30 YHSNYQTNQIVCLFV-----YLFICLFVYLFICLFVYLFICLFVYLFICLFVY-LFICLF 83
Query: 222 VXLIM 236
V L +
Sbjct: 84 VYLFI 88
>UniRef50_A4QZ86 Cluster: Predicted protein; n=1; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 84
Score = 31.9 bits (69), Expect = 2.8
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 266 KIDVKYHMPLHYQXDINAD--KNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQ 111
KID Y + LH + +A+ K + A I K ++ HNHEQ + ++KQ
Sbjct: 31 KIDECYQIYLHNEKKKSAELEKKLAEALKMIKKLEALKIVMEHNHEQANNSSKQ 84
>UniRef50_Q9U8G1 Cluster: Erythrocyte membrane protein 3; n=4;
Plasmodium falciparum|Rep: Erythrocyte membrane protein
3 - Plasmodium falciparum
Length = 1680
Score = 31.1 bits (67), Expect = 4.9
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -1
Query: 254 KYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDAT 84
K H+ YQ D N + + YD ++ K I N HE VDE ++ E+ D T
Sbjct: 640 KGHVSREYQLD-NEGPSTLKEYDQTELAKGKD-ITNKPHESVDEYDQTELAKGKDIT 694
>UniRef50_Q245L6 Cluster: DUTP diphosphatase; n=1; Tetrahymena
thermophila SB210|Rep: DUTP diphosphatase - Tetrahymena
thermophila SB210
Length = 1697
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = -1
Query: 284 DSSNCIKIDVKYHMPLHYQXDINADKNVVNAYDAID-VDPNKKFIINHNHEQVDETNKQE 108
D+SN ++ DVK ++ + IN + N + Y I+ ++ +++F +N E++ + + +
Sbjct: 1347 DNSNNLQSDVKLNLDISVNGLINIENNNLQPYTKINSINSSQQFFNQNNQEEIIKNCQHQ 1406
Query: 107 VVD 99
V+
Sbjct: 1407 KVE 1409
>UniRef50_A2EDE6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 2166
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = -1
Query: 209 KNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTD 90
KNV ++YD+ D + KK I++ + + +E K+ V D ++
Sbjct: 1081 KNVFDSYDSEDRNQKKKRILDSSSSESEEIKKKNVFDSSE 1120
>UniRef50_Q8I2S4 Cluster: NADPH-cytochrome p450 reductase; n=2;
Plasmodium|Rep: NADPH-cytochrome p450 reductase -
Plasmodium falciparum (isolate 3D7)
Length = 764
Score = 30.7 bits (66), Expect = 6.5
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = -1
Query: 269 IKIDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVV 102
IK+D++Y+ L + D +KNVV + N + ++NHN + NK +
Sbjct: 221 IKLDIQYYDHL-IEEDNKKEKNVVTENIINESVTNNQQLLNHNQNNLSINNKSNYI 275
>UniRef50_Q7RD79 Cluster: Protein kinase domain, putative; n=9;
Plasmodium (Vinckeia)|Rep: Protein kinase domain,
putative - Plasmodium yoelii yoelii
Length = 2514
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = -1
Query: 257 VKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTY 78
+KY Q DI ++++ N A D+ N N+N+ + DE ++ +V+K Y
Sbjct: 123 IKYKNKCEKQYDIEMEEDI-NCKGANDIFYNSYNYCNNNNSKRDEKIEKNIVEKNIENKY 181
Query: 77 N 75
N
Sbjct: 182 N 182
>UniRef50_Q4XJ05 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 261
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 251 YHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDKT 93
Y P NA+KN +D I + K IN HEQ +K + KT
Sbjct: 71 YDTPSKQYGKTNAEKNFSEYFDDIKMPYANKDYINSEHEQTKSDDKHIKITKT 123
>UniRef50_Q4X6V3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 71
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/60 (25%), Positives = 32/60 (53%)
Frame = +3
Query: 51 HLNFYDARIVCCCVSFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVXL 230
H ++D +VC F + +LF+ +I + I++ + V+ +I++Y + C+N L
Sbjct: 9 HTVYFDVPMVC---HFWEMYLFITYIQSILKKIHFHPILNVSTTGIIQLYIIKGCLNFLL 65
>UniRef50_Q4UIL1 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1260
Score = 30.7 bits (66), Expect = 6.5
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 224 DINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEV 105
D N +N+VN+Y+ + D KKF N E + + NK++V
Sbjct: 958 DSNFYENLVNSYNTLREDSLKKF--NERKENIKKRNKEQV 995
>UniRef50_Q5UWB4 Cluster: Putative uncharacterized protein; n=1;
Haloarcula marismortui|Rep: Putative uncharacterized
protein - Haloarcula marismortui (Halobacterium
marismortui)
Length = 164
Score = 30.7 bits (66), Expect = 6.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 173 DPNKKFIINHNHEQVDETNKQEVVDKTDAT 84
DP I+ HE V ET E++D+TDAT
Sbjct: 48 DPEPLTIVAGPHESVSETRYVELLDETDAT 77
>UniRef50_UPI00006CF259 Cluster: cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1091
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -1
Query: 191 YDAIDVDPNKKFIINHNHEQVDETNKQEVVDKTDATTYN 75
+DA + DPN KF+ N N Q++ N +++++ + N
Sbjct: 475 FDAYEEDPNSKFLFNKN-SQINSYNNPQMLNQNTESPQN 512
>UniRef50_Q237T2 Cluster: ABC transporter family protein; n=1;
Tetrahymena thermophila SB210|Rep: ABC transporter
family protein - Tetrahymena thermophila SB210
Length = 1340
Score = 30.3 bits (65), Expect = 8.6
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +3
Query: 93 SFIDDFLFVCFIDLFVIMINYKFFVGVNIDSVIRIYN 203
SF + FLF+ + L +++I F+V +++ S R+YN
Sbjct: 792 SFQETFLFLTMLQLSLMLIGAFFYVVISLLSCYRLYN 828
>UniRef50_A5K1E2 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 6648
Score = 30.3 bits (65), Expect = 8.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 114 FVCFIDLFVIMINYKFFVGVNIDSVIRIYNVFICVNVXL 230
F+ + L+++++N K F+ I SVI I N+F N+ L
Sbjct: 3759 FINIVLLYMLIMNRKIFLHECISSVINILNIFKVYNLKL 3797
>UniRef50_A6UX42 Cluster: PUA domain containing protein; n=1;
Methanococcus aeolicus Nankai-3|Rep: PUA domain
containing protein - Methanococcus aeolicus Nankai-3
Length = 602
Score = 30.3 bits (65), Expect = 8.6
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 263 IDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIINHNHEQVDETNKQEVVDK 96
I V H+P HY + DKN++ YD I + + N++ + +T K+ DK
Sbjct: 382 ISVIAHLPKHYYEIL--DKNLIEKYDIISTVEDDRPTTNNSLATLKDTLKEISADK 435
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,400,371
Number of Sequences: 1657284
Number of extensions: 3295745
Number of successful extensions: 11113
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 10773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11102
length of database: 575,637,011
effective HSP length: 72
effective length of database: 456,312,563
effective search space used: 10038876386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -