Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a06
         (284 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   1.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   2.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   2.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   2.6  
DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    21   3.4  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   4.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   4.5  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   4.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   4.5  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   4.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    19   7.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    19   7.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           19   7.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 224 DINADKNVVNAYDAID 177
           DIN  K +V ++DAID
Sbjct: 497 DINTWKMLVKSFDAID 512


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 266 KIDVKYHMPLHYQXDINADKNVVNAYDAIDVDPNKKFIIN 147
           K DVK  +P  +      D    N Y+   V PN   +I+
Sbjct: 487 KPDVKIFLPFRFHIYTPEDLFAPNTYNRHLVAPNGDHVIS 526


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  YVVASVLSTTSCLF 120
           YVVA++ +T+SC F
Sbjct: 238 YVVATLGTTSSCTF 251


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 209 KNVVNAYDAIDVDPNKKFIIN 147
           KNV  AY    +D N +F+++
Sbjct: 92  KNVTRAYCNKKIDRNLQFVVS 112


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 2.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 209 KNVVNAYDAIDVDPNKKFIIN 147
           KNV  AY    +D N +F+++
Sbjct: 92  KNVTRAYCNKKIDRNLQFVVS 112


>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
           protein 7 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 3.4
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
 Frame = -1

Query: 215 ADKNVVNAYDAIDVDP---NKKFIINHNHEQVDE 123
           A+    N YD +DVD    N + + N+    +DE
Sbjct: 19  AENKYTNKYDNVDVDKILNNDRVLTNYIKCLMDE 52


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 254 KYHMPLHYQXDINADKNV 201
           K+HMP       N D+NV
Sbjct: 942 KHHMPCPSNLVFNPDQNV 959


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 125  ETNKQEVVDKTD 90
            ETN+ E++DK +
Sbjct: 1049 ETNEHEIIDKIE 1060



 Score = 19.4 bits (38), Expect = 7.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 125 ETNKQEVVDKTD 90
           ETN  E++DK +
Sbjct: 671 ETNDHEIIDKIE 682



 Score = 19.4 bits (38), Expect = 7.8
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +3

Query: 33   YFKL*YHLNFYDARIVCCCVSFIDDFLFVCFIDLFVI 143
            +F + Y   F   +IV   + +I     +C  D+F I
Sbjct: 976  FFPIDYTSAFSSEKIVWLHLVYISFLGIICAADVFYI 1012


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 173 DPNKKFIINHNHEQVDETNKQEVVDKTD 90
           DP K   +N+N + +DE  K     +T+
Sbjct: 103 DPAKWIRLNNNLQYIDEVLKNRDSHETN 130


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 173 DPNKKFIINHNHEQVDETNKQEVVDKTD 90
           DP K   +N+N + +DE  K     +T+
Sbjct: 103 DPAKWIRLNNNLQYIDEVLKNRDSHETN 130


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 4.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 125 ETNKQEVVDKTD 90
           ETN+ E++DK +
Sbjct: 330 ETNEHEIIDKIE 341


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 170 PNKKFIINHNHEQVDETNKQEVVDKTDA 87
           P  K +IN    Q+DE    +  D + A
Sbjct: 98  PENKTLINETSLQLDENKLDKKNDDSPA 125


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 170 PNKKFIINHNHEQVDETNKQEVVDKTDA 87
           P  K +IN    Q+DE    +  D + A
Sbjct: 98  PENKTLINETSLQLDENKLDKKNDDSPA 125


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.4 bits (38), Expect = 7.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 170 PNKKFIINHNHEQVDETNKQEVVDKTDA 87
           P  K +IN    Q+DE    +  D + A
Sbjct: 98  PENKTLINETSLQLDENKLDKKDDDSPA 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,658
Number of Sequences: 336
Number of extensions: 1111
Number of successful extensions: 23
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4897022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)