Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a04
         (244 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.16 
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   0.83 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   3.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   3.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    19   5.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    19   5.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    19   5.8  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    19   7.7  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 24.6 bits (51), Expect = 0.16
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 143 CQLLPWIHGQHEEIVHCQSFRIF*TQNI 60
           CQL+  + G H+ + +C +F  F   N+
Sbjct: 93  CQLMSKLLGNHQLVYNCHTFGRFLAPNL 120


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 0.83
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 76  FRLKILW*LLVTCRECHVLSLHKAY 2
           FR+ ILW +LV   + + L + K Y
Sbjct: 306 FRVFILWIILVPEEQVYHLEIEKYY 330


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 186 KLLSLSFKTLFYTLLSVTAV 127
           KLL+ +   + YTL+SV+ V
Sbjct: 275 KLLAANLCLVIYTLVSVSLV 294


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.2 bits (40), Expect = 3.3
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 186 KLLSLSFKTLFYTLLSVTAV 127
           KLL+ +   + YTL+SV+ V
Sbjct: 275 KLLAANLCLVIYTLVSVSLV 294


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -3

Query: 131 PWIHGQHEEIV 99
           PW+   H+E+V
Sbjct: 495 PWVQHGHQELV 505


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 33  SLHVTNSHHNILSLKYSKRLAVDNFL 110
           +LH+ + HHN       ++   D FL
Sbjct: 404 NLHIYDLHHNPAIYPDPEKFDPDRFL 429


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 19.4 bits (38), Expect = 5.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 33  SLHVTNSHHNILSLKYSKRLAVDNFL 110
           +LH+ + HHN       ++   D FL
Sbjct: 404 NLHIYDLHHNPAIYPDPEKFDPDRFL 429


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 19.0 bits (37), Expect = 7.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +3

Query: 36  LHVTNSHHNILSLKYSKRLAVDNFL 110
           LH+ + HHN       ++   D FL
Sbjct: 88  LHIYDMHHNPQVYPDPEKFDPDRFL 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,693
Number of Sequences: 336
Number of extensions: 931
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3642386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)