Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc29a04
(244 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 2.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 2.2
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 20 3.8
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 20 5.0
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 20 5.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 19 6.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 19 6.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 19 6.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 19 6.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 8.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 8.8
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.0 bits (42), Expect = 2.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 150 CKIAF*KINLTASFCFKC 203
C + F +NL + FC +C
Sbjct: 347 CWLPFFVVNLWSGFCSQC 364
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 2.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = -1
Query: 145 VVSYCRGFTDNTRKLSTANLLEYFRLKIL 59
V+S G + + ANLL FR+ ++
Sbjct: 211 VISGVVGAASSVTSIQVANLLRLFRIPLV 239
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.2 bits (40), Expect = 3.8
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 196 KQNEAVKFIF*NAILHFVVSYCRGFTDNTRKLSTANLL 83
K+ + V +F + I+ F +YC TD++ + N+L
Sbjct: 405 KKYDCVTLLF-SGIVGFG-AYCAAHTDSSGAMKIVNML 440
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 19.8 bits (39), Expect = 5.0
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 60 NILSLKYSKRLAVDNFLVLSVNPRQ*LTTKCKIAF*KINLTA 185
NI+++ A D ++ V P Q + C F KI TA
Sbjct: 73 NIIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTA 114
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 19.8 bits (39), Expect = 5.0
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 196 KQNEAVKFIF*NAILHFVVSYCRGFTDNTRKLSTANLL 83
K+ + V +F + I+ F +YC TD++ + N+L
Sbjct: 405 KKYDCVTLLF-SGIVGFG-AYCAAHTDSSGAVKIVNML 440
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 19.4 bits (38), Expect = 6.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 173 YLLKRYFTLCCQ 138
YL++R+ L CQ
Sbjct: 176 YLMRRHLILSCQ 187
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 19.4 bits (38), Expect = 6.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 173 YLLKRYFTLCCQ 138
YL++R+ L CQ
Sbjct: 176 YLMRRHLILSCQ 187
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 19.4 bits (38), Expect = 6.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 173 YLLKRYFTLCCQ 138
YL++R+ L CQ
Sbjct: 227 YLMRRHLILSCQ 238
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 19.4 bits (38), Expect = 6.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 173 YLLKRYFTLCCQ 138
YL++R+ L CQ
Sbjct: 176 YLMRRHLILSCQ 187
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.0 bits (37), Expect = 8.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 138 VTAVDSRTTRGNCPL 94
VTAV T R CP+
Sbjct: 528 VTAVAGETLRLKCPV 542
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.0 bits (37), Expect = 8.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 138 VTAVDSRTTRGNCPL 94
VTAV T R CP+
Sbjct: 528 VTAVAGETLRLKCPV 542
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,847
Number of Sequences: 438
Number of extensions: 1059
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4149981
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
- SilkBase 1999-2023 -