Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a03
         (356 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...   102   1e-22
AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...   102   1e-22
AY069183-1|AAL39328.1|  357|Drosophila melanogaster GH23334p pro...    28   4.0  
AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,...    27   7.0  
AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,...    27   7.0  

>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score =  102 bits (245), Expect = 1e-22
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +2

Query: 2   KVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 163
           K MKDILGRFKELQFFTGESMDCDGMVA++EYR+ +G  +P++MFFKHGLEEEK
Sbjct: 118 KAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEK 171


>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score =  102 bits (245), Expect = 1e-22
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +2

Query: 2   KVMKDILGRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGLEEEK 163
           K MKDILGRFKELQFFTGESMDCDGMVA++EYR+ +G  +P++MFFKHGLEEEK
Sbjct: 118 KAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEK 171


>AY069183-1|AAL39328.1|  357|Drosophila melanogaster GH23334p
           protein.
          Length = 357

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 133 HHDWYLRTIKVSIFHHGNHAITIH 62
           HH+    TI  +  HHG+ A+T+H
Sbjct: 289 HHNASTATIATTTHHHGHVALTVH 312


>AE014298-166|AAN09037.1| 1201|Drosophila melanogaster CG3638-PC,
           isoform C protein.
          Length = 1201

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -3

Query: 261 CQDADMIDK*IKKQKYQGASLELLSYFL-SNI*NFSSSRPCLKNIMIGICVPSKSLYSIM 85
           CQD  M        + Q  +L+L  +   SN+ N + S+  LKNI     +P  +  SI 
Sbjct: 620 CQDPTMESSSSNTAQQQQQNLQLQQHQQQSNLINQNQSQSTLKNIFASATLPRSTGSSIR 679

Query: 84  ATMPSQSMDSPV 49
           + +  Q+ ++ +
Sbjct: 680 SVLSVQTSNAGI 691


>AE014298-165|AAN09036.1| 1404|Drosophila melanogaster CG3638-PD,
           isoform D protein.
          Length = 1404

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = -3

Query: 261 CQDADMIDK*IKKQKYQGASLELLSYFL-SNI*NFSSSRPCLKNIMIGICVPSKSLYSIM 85
           CQD  M        + Q  +L+L  +   SN+ N + S+  LKNI     +P  +  SI 
Sbjct: 620 CQDPTMESSSSNTAQQQQQNLQLQQHQQQSNLINQNQSQSTLKNIFASATLPRSTGSSIR 679

Query: 84  ATMPSQSMDSPV 49
           + +  Q+ ++ +
Sbjct: 680 SVLSVQTSNAGI 691


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,186,204
Number of Sequences: 53049
Number of extensions: 264315
Number of successful extensions: 485
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)