Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a03
         (356 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   7.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   7.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   7.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.6  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   7.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    20   7.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = +2

Query: 23  GRFKELQFFTGESMDCDGMVAMMEYRDFDGTQIPIMMFFKHGL 151
           G++  +Q    +  + +    M+E RD   +  P  +  KHGL
Sbjct: 73  GQYARVQQSMPDGWETEISDQMLELRDLPISGKPFQIRMKHGL 115


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 90  WNIETLMVRKY 122
           WN+ T M  KY
Sbjct: 47  WNVPTFMCHKY 57


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 217 LLFFYLFINHVRI 255
           +LF+YL   HVR+
Sbjct: 781 ILFWYLCAGHVRL 793


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 217 LLFFYLFINHVRI 255
           +LF+YL   HVR+
Sbjct: 819 ILFWYLCAGHVRL 831


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 165 NFSSSRPCLKNIMIGI 118
           ++ S RP L++I+IGI
Sbjct: 134 HYYSDRPGLEHIVIGI 149


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 45  SLLGSPWIVMAWLP*WNIE 101
           SLLG P +++   P W  +
Sbjct: 538 SLLGGPLVMVCSAPVWRFQ 556


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 165 NFSSSRPCLKNIMIGI 118
           ++ S RP L++I+IGI
Sbjct: 134 HYYSDRPGLEHIVIGI 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,169
Number of Sequences: 438
Number of extensions: 1884
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)