Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a01
         (606 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   4e-04
UniRef50_UPI000069E524 Cluster: UPI000069E524 related cluster; n...    35   1.7  
UniRef50_UPI00015A7780 Cluster: UPI00015A7780 related cluster; n...    33   4.0  
UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus Carson...    33   5.2  
UniRef50_Q4YXP5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_Q8IB78 Cluster: Nucleoside transporter, putative; n=4; ...    33   6.9  
UniRef50_UPI0000F202CA Cluster: PREDICTED: similar to putative v...    32   9.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = +3

Query: 12  FLLLR*VDELTAHLVLSGYWSP 77
           FLLLR VDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_UPI000069E524 Cluster: UPI000069E524 related cluster; n=7;
           Xenopus tropicalis|Rep: UPI000069E524 UniRef100 entry -
           Xenopus tropicalis
          Length = 311

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 194 EIDSKLMFLGG-LHHTHYEVYVTCLITTYDIS*YKSIVSLTFAINKIFYFVIHIHSKVKN 370
           ++D   +FL   +  ++Y+ ++ C++    +  +   VSL ++I    Y + +  SKV  
Sbjct: 155 KLDHHCVFLNNCVGFSNYKFFLLCVLYALLMCLFTCAVSLYYSILFWTYRLPNTESKVP- 213

Query: 371 LIVLNFILSQFNSLMTFVFFLYH 439
            I++ F+L+   SL  F+FFL H
Sbjct: 214 -IIVLFVLTALFSLFLFLFFLAH 235


>UniRef50_UPI00015A7780 Cluster: UPI00015A7780 related cluster; n=1;
           Danio rerio|Rep: UPI00015A7780 UniRef100 entry - Danio
           rerio
          Length = 420

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 22/79 (27%), Positives = 43/79 (54%)
 Frame = +2

Query: 209 LMFLGGLHHTHYEVYVTCLITTYDIS*YKSIVSLTFAINKIFYFVIHIHSKVKNLIVLNF 388
           + +L  L H+   ++ +  + T++   +  I+S TF IN   + +IH HS + +L + +F
Sbjct: 314 IYYLNSLTHSQQFIHSSIHLLTHNNDSFIHILSQTF-INIQSHSLIHFHSFIYSLTIHSF 372

Query: 389 ILSQFNSLMTFVFFLYHKS 445
           I S  ++  +F+  L H S
Sbjct: 373 IYSLTHN-NSFIHLLIHLS 390


>UniRef50_Q05FK9 Cluster: Putative GTPase; n=1; Candidatus
           Carsonella ruddii PV|Rep: Putative GTPase - Carsonella
           ruddii (strain PV)
          Length = 254

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +2

Query: 251 YVTCLITTYDIS*YKSIVSLTFAINKIFYFVIHIHSKVKNLIV-LNFILSQFNSLMTFVF 427
           +VTCL   Y     KS V L    N +  F I+  SK+  +I+ LN I      +  + +
Sbjct: 136 FVTCLFV-YKFF-IKSFV-LNINSNNLDVFKINFISKIYLIIINLNIIHILIKIIKFYFY 192

Query: 428 FLYHKSFKNEF 460
           FLY K+FKN +
Sbjct: 193 FLYLKNFKNNY 203


>UniRef50_Q4YXP5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 338

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +2

Query: 251 YVTCLITTYDIS*YKSIVSLT-FAINKIFYFVIHIHSKVKNLIVLNFILSQFNSLMTFVF 427
           Y + L+T+  +  Y   ++ + + IN +F  + ++ S  KN I  NFI       +  + 
Sbjct: 157 YSSILVTSQYLKSYYIYINFSGYIINLLFASIEYLSSSFKNYIYFNFIFESLVDYLIAIS 216

Query: 428 FLYH 439
           FLY+
Sbjct: 217 FLYY 220


>UniRef50_Q8IB78 Cluster: Nucleoside transporter, putative; n=4;
           Plasmodium|Rep: Nucleoside transporter, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 585

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 314 FAINKIFYFVIHIHSKVKNLIVLNFILSQFNSLMTFVFFLYHKSFK 451
           F  +  FYFVI I+  ++ L++  FI S  N +   V FL +   K
Sbjct: 209 FITSTFFYFVIKINKDIQKLMLSLFITSAINCIFILVSFLCYTVLK 254


>UniRef50_UPI0000F202CA Cluster: PREDICTED: similar to putative
           vascular inducible G protein-coupled receptor; n=2;
           Danio rerio|Rep: PREDICTED: similar to putative vascular
           inducible G protein-coupled receptor - Danio rerio
          Length = 526

 Score = 32.3 bits (70), Expect = 9.2
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
 Frame = +2

Query: 140 SYNGCPTLQTETHYCFTAEIDSKLMFLGGLHHTHYEVYVTCLITTYDIS*YKSIVSLTFA 319
           S+NG   L+  T  C T  IDSK +     H T + V ++ +     ++ Y   ++L  A
Sbjct: 182 SWNGKGNLEWTTTGCETKMIDSKSIKCSCSHLTFFAVLMSPVTDANAVAPYLESLTLISA 241

Query: 320 IN---KIFY--FVIHIH---SKVKNLIVLNFILSQFNSLMTF-VFFLYHKSFKN 454
           I     +F+  F + IH    K K+      +++ F +L    V FL ++S  N
Sbjct: 242 IGCGISVFFLAFALFIHFLLRKAKSNQATKILINMFGALFLLNVSFLSNESVAN 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,235,561
Number of Sequences: 1657284
Number of extensions: 11220435
Number of successful extensions: 22374
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22371
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)