Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a01
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   0.86 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.5  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.5  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.6  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   8.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 24.2 bits (50), Expect = 0.86
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +2

Query: 329 IFYFVIHIHSKVKNLIVLNFILSQFNSLMTFVFFLYHKSFKNE 457
           I +F   + S + NL+ +    + FN  +  VF    K +KNE
Sbjct: 143 ILFFAQGLTSPIFNLVYVYCCDNNFNVFLRQVFTCRCKDYKNE 185


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 296 SIVSLTFAINKIFYFVIHIHSKVKNLIVLNFILSQFNS 409
           SI  L    N+ F + I +     +L+VLN+I   FN+
Sbjct: 200 SIKELNMIFNEFFGWPIIMIILYSSLMVLNYIDEVFNN 237


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 160 GGAAVVTIIETLELISQGGWRI 95
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -2

Query: 299 CFYINLCHKLLLDMLHTLHNVYGAT 225
           C Y+   +++L  M+  +++++G T
Sbjct: 203 CRYVGTLYRILTTMMEMVNDIFGWT 227


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -1

Query: 402 NWLNIKFSTIKFFTLLCICMTK*KILFIAKVSET 301
           NW N K    KF+  +C  M+   +  I  +  T
Sbjct: 301 NWKNDKSLKRKFYLTICTIMSAAAVEHILSIVNT 334


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 520 VPKYLTPYPNFFKYITAIALKFVL 449
           VP +LTP  +    +T ++L+F L
Sbjct: 4   VPGWLTPPHSLGNTVTPVSLRFKL 27


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +2

Query: 116 YKF*GLNYSYNGC 154
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 330 FFILSYIYT 356
           FF LSYIYT
Sbjct: 88  FFYLSYIYT 96


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 330 FFILSYIYT 356
           FF LSYIYT
Sbjct: 44  FFYLSYIYT 52


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 97  SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 127


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 120 SSRVSIIVTTAAPPFKPKRITASRQK*TPNS 212
           S   S +  + +PP KP   TAS+   +P S
Sbjct: 141 SGLTSPLSVSTSPPGKPATSTASQNLSSPAS 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,209
Number of Sequences: 336
Number of extensions: 3413
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)