Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc29a01
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001347-1|AAN71102.1|  620|Drosophila melanogaster AT24465p pro...    32   0.70 
AY060733-1|AAL28281.1|  513|Drosophila melanogaster GH18278p pro...    32   0.70 
AE013599-2779|AAF57630.2|  513|Drosophila melanogaster CG15097-P...    32   0.70 
AE013599-2778|AAO41354.1|  617|Drosophila melanogaster CG15097-P...    32   0.70 

>BT001347-1|AAN71102.1|  620|Drosophila melanogaster AT24465p
           protein.
          Length = 620

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 143 YNGCPTLQTETHYCFTAEIDSKLMFLGGLHHTHYE 247
           ++ CP + T   YC  A +++ +  LGG   T+Y+
Sbjct: 446 WSSCPAMSTRRRYCRLAVLENCIYSLGGFDSTNYQ 480


>AY060733-1|AAL28281.1|  513|Drosophila melanogaster GH18278p
           protein.
          Length = 513

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 143 YNGCPTLQTETHYCFTAEIDSKLMFLGGLHHTHYE 247
           ++ CP + T   YC  A +++ +  LGG   T+Y+
Sbjct: 339 WSSCPAMSTRRRYCRLAVLENCIYSLGGFDSTNYQ 373


>AE013599-2779|AAF57630.2|  513|Drosophila melanogaster CG15097-PA,
           isoform A protein.
          Length = 513

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 143 YNGCPTLQTETHYCFTAEIDSKLMFLGGLHHTHYE 247
           ++ CP + T   YC  A +++ +  LGG   T+Y+
Sbjct: 339 WSSCPAMSTRRRYCRLAVLENCIYSLGGFDSTNYQ 373


>AE013599-2778|AAO41354.1|  617|Drosophila melanogaster CG15097-PB,
           isoform B protein.
          Length = 617

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 143 YNGCPTLQTETHYCFTAEIDSKLMFLGGLHHTHYE 247
           ++ CP + T   YC  A +++ +  LGG   T+Y+
Sbjct: 443 WSSCPAMSTRRRYCRLAVLENCIYSLGGFDSTNYQ 477


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,923,375
Number of Sequences: 53049
Number of extensions: 526974
Number of successful extensions: 1105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)