Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28p20
         (284 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016004-1|AAV36889.1|  113|Drosophila melanogaster RE39106p pro...    97   2e-21
AE014297-2204|AAF55312.1|  113|Drosophila melanogaster CG10406-P...    97   2e-21
BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p pro...    27   2.8  
AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-P...    27   2.8  
AE014297-4292|AAO41611.2|  904|Drosophila melanogaster CG33204-P...    27   4.9  
AF292388-1|AAK97051.1|  676|Drosophila melanogaster biniou protein.    26   8.6  

>BT016004-1|AAV36889.1|  113|Drosophila melanogaster RE39106p
           protein.
          Length = 113

 Score = 97.5 bits (232), Expect = 2e-21
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   FSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 167
           FS  P+H  + +I++YPRH+ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 45  FSEEPIHKRDYVINWYPRHVETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99


>AE014297-2204|AAF55312.1|  113|Drosophila melanogaster CG10406-PA
           protein.
          Length = 113

 Score = 97.5 bits (232), Expect = 2e-21
 Identities = 41/55 (74%), Positives = 48/55 (87%)
 Frame = +3

Query: 3   FSARPLHTNEEIIHYYPRHMETHKLMMNLRDYGLFRDEHQDFKEEMKRLRELRGK 167
           FS  P+H  + +I++YPRH+ETH LM NLRDYGLFRDEHQDFKEEMKRLR+LRGK
Sbjct: 45  FSEEPIHKRDYVINWYPRHVETHLLMKNLRDYGLFRDEHQDFKEEMKRLRKLRGK 99


>BT025107-1|ABE73278.1|  501|Drosophila melanogaster IP10618p
           protein.
          Length = 501

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 42  HYYPRHMETHKLMMN-LRDYGLFRDEHQDFKEEMKRLRELRGKVKV 176
           +Y    ++ +K + N L  +GL R  HQD+ + +  L++ +G +KV
Sbjct: 79  NYLDHKVDRYKYVSNPLNSFGLLRRAHQDWPKLIAYLKD-QGNIKV 123


>AE014134-1123|ABC65879.1|  398|Drosophila melanogaster CG34009-PA
           protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
 Frame = +3

Query: 42  HYYPRHMETHKLMMN-LRDYGLFRDEHQDFKEEMKRLRELRGKVKV 176
           +Y    ++ +K + N L  +GL R  HQD+ + +  L++ +G +KV
Sbjct: 304 NYLDHKVDRYKYVSNPLNSFGLLRRAHQDWPKLIAYLKD-QGNIKV 348


>AE014297-4292|AAO41611.2|  904|Drosophila melanogaster CG33204-PA
           protein.
          Length = 904

 Score = 26.6 bits (56), Expect = 4.9
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 75  LMMNLRDYGLFRDEHQDFKEEMKRLRELRGKVK 173
           ++M LR+   F  E + F+E M++ RELR +VK
Sbjct: 528 ILMLLREDNQFL-EAKKFEERMRKRRELRDRVK 559


>AF292388-1|AAK97051.1|  676|Drosophila melanogaster biniou protein.
          Length = 676

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -3

Query: 144 SSSPP*SLDAHHGIDHNLLNSSSVYASP 61
           ++ PP      HGIDH+ ++   VY  P
Sbjct: 625 TTPPPSQSGGSHGIDHSPIDRKPVYLPP 652


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,621,465
Number of Sequences: 53049
Number of extensions: 182174
Number of successful extensions: 476
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)