Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28p12
(713 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein. 36 0.11
AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein. 34 0.58
AL365496-3|CAM19869.1| 1539|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-6|CAM21537.1| 1539|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-3|CAI15200.1| 961|Homo sapiens protocadherin 15 protein. 34 0.58
AL360214-1|CAM21534.1| 718|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-6|CAM15120.1| 1539|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-3|CAH71768.1| 961|Homo sapiens protocadherin 15 protein. 34 0.58
AL356114-1|CAM15115.1| 718|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-5|CAM16787.1| 1539|Homo sapiens protocadherin 15 protein. 34 0.58
AL353784-2|CAH72389.1| 961|Homo sapiens protocadherin 15 protein. 34 0.58
AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhe... 31 5.4
AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhe... 31 5.4
AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhe... 31 5.4
AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhe... 31 5.4
AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein. 31 5.4
AL365496-5|CAM19868.1| 1785|Homo sapiens protocadherin 15 protein. 30 9.5
AL365496-1|CAM19866.1| 1684|Homo sapiens protocadherin 15 protein. 30 9.5
AL360214-8|CAM21538.1| 1785|Homo sapiens protocadherin 15 protein. 30 9.5
AL360214-4|CAM21536.1| 1684|Homo sapiens protocadherin 15 protein. 30 9.5
AL356114-8|CAM15119.1| 1785|Homo sapiens protocadherin 15 protein. 30 9.5
AL356114-4|CAM15117.1| 1684|Homo sapiens protocadherin 15 protein. 30 9.5
AL353784-7|CAM16789.1| 1785|Homo sapiens protocadherin 15 protein. 30 9.5
AL353784-3|CAM16785.1| 1684|Homo sapiens protocadherin 15 protein. 30 9.5
>AY029205-1|AAK31581.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 36.3 bits (80), Expect = 0.11
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLLPVDREEQQTYTFSIT 482
>AY029237-1|AAK31804.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL365496-10|CAM19874.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL365496-9|CAM19873.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL365496-8|CAM19872.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 460
>AL365496-7|CAH73916.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL365496-4|CAM19871.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL365496-3|CAM19869.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-13|CAM21542.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-12|CAM21543.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-11|CAM21544.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 460
>AL360214-10|CAI15201.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-7|CAM21539.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-6|CAM21537.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-3|CAI15200.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL360214-1|CAM21534.1| 718|Homo sapiens protocadherin 15 protein.
Length = 718
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 460
>AL356114-13|CAM15124.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-12|CAM15123.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-11|CAM15125.1| 1932|Homo sapiens protocadherin 15 protein.
Length = 1932
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 460
>AL356114-10|CAH71769.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-7|CAM15121.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-6|CAM15120.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-3|CAH71768.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL356114-1|CAM15115.1| 718|Homo sapiens protocadherin 15 protein.
Length = 718
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 410 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 460
>AL353784-11|CAM16792.1| 1957|Homo sapiens protocadherin 15 protein.
Length = 1957
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL353784-10|CAM16791.1| 1952|Homo sapiens protocadherin 15 protein.
Length = 1952
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL353784-9|CAH72390.1| 1955|Homo sapiens protocadherin 15 protein.
Length = 1955
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL353784-6|CAM16788.1| 981|Homo sapiens protocadherin 15 protein.
Length = 981
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL353784-5|CAM16787.1| 1539|Homo sapiens protocadherin 15 protein.
Length = 1539
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AL353784-2|CAH72389.1| 961|Homo sapiens protocadherin 15 protein.
Length = 961
Score = 33.9 bits (74), Expect = 0.58
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +2
Query: 560 DYESNKQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
D E K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 432 DIEDTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 482
>AF491813-1|AAM09558.1| 2113|Homo sapiens Down syndrome cell adhesion
molecule 2 protein.
Length = 2113
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYI-- 688
+T G+ T SD Y ++ D D + TE ++ Y L EHA L +
Sbjct: 1827 RTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQH 1886
Query: 689 --FKITGC 706
F+IT C
Sbjct: 1887 AKFEITEC 1894
>AF334384-1|AAL57166.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule DSCAML1 protein.
Length = 2053
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYI-- 688
+T G+ T SD Y ++ D D + TE ++ Y L EHA L +
Sbjct: 1767 RTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQH 1826
Query: 689 --FKITGC 706
F+IT C
Sbjct: 1827 AKFEITEC 1834
>AF304305-1|AAN32614.1| 1842|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1b protein.
Length = 1842
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYI-- 688
+T G+ T SD Y ++ D D + TE ++ Y L EHA L +
Sbjct: 1556 RTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQH 1615
Query: 689 --FKITGC 706
F+IT C
Sbjct: 1616 AKFEITEC 1623
>AF304304-1|AAN32613.1| 2053|Homo sapiens Down syndrome cell adhesion
molecule like-protein 1a protein.
Length = 2053
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYI-- 688
+T G+ T SD Y ++ D D + TE ++ Y L EHA L +
Sbjct: 1767 RTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQH 1826
Query: 689 --FKITGC 706
F+IT C
Sbjct: 1827 AKFEITEC 1834
>AB032958-1|BAA86446.2| 2092|Homo sapiens KIAA1132 protein protein.
Length = 2092
Score = 30.7 bits (66), Expect = 5.4
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +2
Query: 515 KTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITEVEATQYLTLLLIVEHAYLHYYI-- 688
+T G+ T SD Y ++ D D + TE ++ Y L EHA L +
Sbjct: 1806 RTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQH 1865
Query: 689 --FKITGC 706
F+IT C
Sbjct: 1866 AKFEITEC 1873
>AL365496-5|CAM19868.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL365496-1|CAM19866.1| 1684|Homo sapiens protocadherin 15 protein.
Length = 1684
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL360214-8|CAM21538.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL360214-4|CAM21536.1| 1684|Homo sapiens protocadherin 15 protein.
Length = 1684
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL356114-8|CAM15119.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL356114-4|CAM15117.1| 1684|Homo sapiens protocadherin 15 protein.
Length = 1684
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL353784-7|CAM16789.1| 1785|Homo sapiens protocadherin 15 protein.
Length = 1785
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
>AL353784-3|CAM16785.1| 1684|Homo sapiens protocadherin 15 protein.
Length = 1684
Score = 29.9 bits (64), Expect = 9.5
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +2
Query: 575 KQPDYDMDLSD----FSITEVEATQYLTLLLIVEHAYLHYYIFKIT 700
K P+ + L+D F++T+ T+YLTLL V+ Y F IT
Sbjct: 444 KDPELHLFLNDYTSVFTVTQTGITRYLTLLQPVDREEQQTYTFSIT 489
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,669,936
Number of Sequences: 237096
Number of extensions: 1863208
Number of successful extensions: 4913
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 4713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4913
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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