Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28o18
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   1.5  
AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.         23   5.9  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   7.8  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 173 SGCPEILKNPDKSSRYFIVENINRNQS 93
           SGCP I   P KS+    + +I  N S
Sbjct: 250 SGCPTIPAGPSKSATNHSINSIQSNDS 276


>AJ304410-1|CAC67443.1|  190|Anopheles gambiae calpain protein.
          Length = 190

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 77  EFTLKYFDFYLYFQQ*NI*MICPDFLEFQDILK 175
           EF + Y DF  YF +  I  + PD L   ++ +
Sbjct: 49  EFWMSYRDFTRYFDRMEICNLSPDSLSDDEMTR 81


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 170 LKKMRILDDKIVYALNTSIPTESFKAKID 256
           L  + +LDD ++Y L    P+E F  + D
Sbjct: 42  LVDLDLLDDPVLYLLYDVNPSEGFNLRRD 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,484
Number of Sequences: 2352
Number of extensions: 7169
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)