Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28o17
         (290 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL845439-6|CAI18544.1|  420|Homo sapiens ring finger protein 39 ...    27   8.3  
AL845439-5|CAI18543.1|  354|Homo sapiens ring finger protein 39 ...    27   8.3  

>AL845439-6|CAI18544.1|  420|Homo sapiens ring finger protein 39
           protein.
          Length = 420

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 42  TXDPGAXH*RAAEVTEHATINSQTFHTSDSSEGTKRFRRLPS 167
           T DPG  H R    T+  ++      T    +G KRF +LP+
Sbjct: 231 TLDPGTAHRRLLISTDRRSVQLAPPGTPAPPDGPKRFDQLPA 272


>AL845439-5|CAI18543.1|  354|Homo sapiens ring finger protein 39
           protein.
          Length = 354

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 42  TXDPGAXH*RAAEVTEHATINSQTFHTSDSSEGTKRFRRLPS 167
           T DPG  H R    T+  ++      T    +G KRF +LP+
Sbjct: 231 TLDPGTAHRRLLISTDRRSVQLAPPGTPAPPDGPKRFDQLPA 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,673,589
Number of Sequences: 237096
Number of extensions: 561042
Number of successful extensions: 1524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1524
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)