Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28o17
         (290 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA...    31   0.24 
BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p pro...    27   2.9  
AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p pro...    27   2.9  
AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-P...    27   2.9  
AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA ...    27   2.9  
AE014296-1323|AAN12020.1|  294|Drosophila melanogaster CG32371-P...    26   6.8  
AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p pro...    26   9.0  
AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-P...    26   9.0  

>AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA
           protein.
          Length = 386

 Score = 31.1 bits (67), Expect = 0.24
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 145 FVPSLLSDVWNVWLLIVACSVTSAA 71
           F  SLL ++W+ WL I AC +T  A
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKA 312


>BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p
           protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 113 IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 208
           +P + +  R   +  PALVW +  TK  L  F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493


>AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p
           protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 207 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 103
           +SC ++ +   +   A D+ +S+++  YCR C   GC
Sbjct: 93  RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129


>AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-PA
           protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 207 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 103
           +SC ++ +   +   A D+ +S+++  YCR C   GC
Sbjct: 93  RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129


>AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA
           protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 113 IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 208
           +P + +  R   +  PALVW +  TK  L  F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493


>AE014296-1323|AAN12020.1|  294|Drosophila melanogaster CG32371-PA
           protein.
          Length = 294

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 18  AARVDLAHTXDPGAXH*RAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 194
           +A+ DLA T      H    + TE A+  ++   T   SEG+ +  R    +  R+ Q R
Sbjct: 199 SAQTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258


>AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p
           protein.
          Length = 576

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 64  IDEPPKLXSTLLLTARHSTHPTVAKERSDF 153
           + +PPK   +     R+  HPT+A  RS F
Sbjct: 118 VKQPPKERRSGTQRTRNQQHPTLATSRSGF 147


>AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-PA
           protein.
          Length = 575

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 64  IDEPPKLXSTLLLTARHSTHPTVAKERSDF 153
           + +PPK   +     R+  HPT+A  RS F
Sbjct: 118 VKQPPKERRSGTQRTRNQQHPTLATSRSGF 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,673,835
Number of Sequences: 53049
Number of extensions: 166419
Number of successful extensions: 438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 485663193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)