Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28o07
(368 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY059435-1|AAL13341.1| 609|Drosophila melanogaster GH02003p pro... 34 0.051
AE014296-2294|AAF49806.1| 516|Drosophila melanogaster CG32130-P... 34 0.051
AE014296-2293|AAF49808.1| 516|Drosophila melanogaster CG32130-P... 34 0.051
AE014296-2292|AAF49807.1| 542|Drosophila melanogaster CG32130-P... 34 0.051
AE014296-2291|AAF49809.2| 609|Drosophila melanogaster CG32130-P... 34 0.051
AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-P... 29 1.9
DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom bod... 28 4.4
AY058595-1|AAL13824.1| 372|Drosophila melanogaster LD29039p pro... 28 4.4
AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein ... 28 4.4
AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-P... 28 4.4
AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-P... 28 4.4
BT023891-1|ABA81825.1| 505|Drosophila melanogaster LP23312p pro... 27 7.7
AL121806-11|CAB58086.1| 505|Drosophila melanogaster EG:BACR42I1... 27 7.7
AE014298-163|AAF45595.1| 505|Drosophila melanogaster CG11382-PB... 27 7.7
>AY059435-1|AAL13341.1| 609|Drosophila melanogaster GH02003p
protein.
Length = 609
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 SVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESN 249
+++++ K+ +Q DVL++M +V+Q+ T E K++ +LDEMLT+ L++ +
Sbjct: 437 TLNSINKIQDIQRDVLELMGKVEQFKG------TREE-----KEYAYLDEMLTRNLLKLD 485
Query: 250 AMVFDETNK-NLKFIHNSISICLNRCINLITIK 345
+ D K +++ C+ IN++ K
Sbjct: 486 TI--DTNGKDSIRLARKEAIKCIQASINVLEAK 516
>AE014296-2294|AAF49806.1| 516|Drosophila melanogaster CG32130-PD,
isoform D protein.
Length = 516
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 SVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESN 249
+++++ K+ +Q DVL++M +V+Q+ T E K++ +LDEMLT+ L++ +
Sbjct: 344 TLNSINKIQDIQRDVLELMGKVEQFKG------TREE-----KEYAYLDEMLTRNLLKLD 392
Query: 250 AMVFDETNK-NLKFIHNSISICLNRCINLITIK 345
+ D K +++ C+ IN++ K
Sbjct: 393 TI--DTNGKDSIRLARKEAIKCIQASINVLEAK 423
>AE014296-2293|AAF49808.1| 516|Drosophila melanogaster CG32130-PB,
isoform B protein.
Length = 516
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 SVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESN 249
+++++ K+ +Q DVL++M +V+Q+ T E K++ +LDEMLT+ L++ +
Sbjct: 344 TLNSINKIQDIQRDVLELMGKVEQFKG------TREE-----KEYAYLDEMLTRNLLKLD 392
Query: 250 AMVFDETNK-NLKFIHNSISICLNRCINLITIK 345
+ D K +++ C+ IN++ K
Sbjct: 393 TI--DTNGKDSIRLARKEAIKCIQASINVLEAK 423
>AE014296-2292|AAF49807.1| 542|Drosophila melanogaster CG32130-PC,
isoform C protein.
Length = 542
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 SVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESN 249
+++++ K+ +Q DVL++M +V+Q+ T E K++ +LDEMLT+ L++ +
Sbjct: 370 TLNSINKIQDIQRDVLELMGKVEQFKG------TREE-----KEYAYLDEMLTRNLLKLD 418
Query: 250 AMVFDETNK-NLKFIHNSISICLNRCINLITIK 345
+ D K +++ C+ IN++ K
Sbjct: 419 TI--DTNGKDSIRLARKEAIKCIQASINVLEAK 449
>AE014296-2291|AAF49809.2| 609|Drosophila melanogaster CG32130-PA,
isoform A protein.
Length = 609
Score = 34.3 bits (75), Expect = 0.051
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +1
Query: 70 SVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTKKLIESN 249
+++++ K+ +Q DVL++M +V+Q+ T E K++ +LDEMLT+ L++ +
Sbjct: 437 TLNSINKIQDIQRDVLELMGKVEQFKG------TREE-----KEYAYLDEMLTRNLLKLD 485
Query: 250 AMVFDETNK-NLKFIHNSISICLNRCINLITIK 345
+ D K +++ C+ IN++ K
Sbjct: 486 TI--DTNGKDSIRLARKEAIKCIQASINVLEAK 516
>AE014297-4737|AAF57145.2| 1284|Drosophila melanogaster CG11339-PA
protein.
Length = 1284
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +3
Query: 48 SKKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHRILKRAG 194
S +KH+H R S R G RSG ++H R H AG
Sbjct: 533 STRKHKHRHRRTSDNESELSRGSGRSGRSGRSHHRKHRRSHRHRRDSAG 581
>DQ465527-1|ABF00987.1| 2501|Drosophila melanogaster mushroom body
defect protein protein.
Length = 2501
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHR 176
K + + + GR D+A + R+ H A++ + + LH+R
Sbjct: 2228 KLRRDRIMGRFDEARHLDQMRLSHSAQAAKSPENNNYSLHNR 2269
>AY058595-1|AAL13824.1| 372|Drosophila melanogaster LD29039p
protein.
Length = 372
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHR 176
K + + + GR D+A + R+ H A++ + + LH+R
Sbjct: 99 KLRRDRIMGRFDEARHLDQMRLSHSAQAAKSPENNNYSLHNR 140
>AF174134-3|AAF88146.1| 2501|Drosophila melanogaster Mud protein
protein.
Length = 2501
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHR 176
K + + + GR D+A + R+ H A++ + + LH+R
Sbjct: 2228 KLRRDRIMGRFDEARHLDQMRLSHSAQAAKSPENNNYSLHNR 2269
>AE014298-2022|AAF48362.2| 2328|Drosophila melanogaster CG12047-PA,
isoform A protein.
Length = 2328
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHR 176
K + + + GR D+A + R+ H A++ + + LH+R
Sbjct: 2055 KLRRDRIMGRFDEARHLDQMRLSHSAQAAKSPENNNYSLHNR 2096
>AE014298-2021|AAN09583.2| 2520|Drosophila melanogaster CG12047-PB,
isoform B protein.
Length = 2520
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 51 KKKHEHVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHHR 176
K + + + GR D+A + R+ H A++ + + LH+R
Sbjct: 2247 KLRRDRIMGRFDEARHLDQMRLSHSAQAAKSPENNNYSLHNR 2288
>BT023891-1|ABA81825.1| 505|Drosophila melanogaster LP23312p
protein.
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 66 HVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHH 173
H +G H FA GH G S H R HH
Sbjct: 94 HFKGESSYGHHFAH---GHSGSHGYASSSGHGRPHH 126
>AL121806-11|CAB58086.1| 505|Drosophila melanogaster
EG:BACR42I17.10 protein.
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 66 HVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHH 173
H +G H FA GH G S H R HH
Sbjct: 94 HFKGESSYGHHFAH---GHSGSHGYASSSGHGRPHH 126
>AE014298-163|AAF45595.1| 505|Drosophila melanogaster CG11382-PB
protein.
Length = 505
Score = 27.1 bits (57), Expect = 7.7
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +3
Query: 66 HVRGRGDKAHSFAERRVGHDARSGPISKQRHARLHH 173
H +G H FA GH G S H R HH
Sbjct: 94 HFKGESSYGHHFAH---GHSGSHGYASSSGHGRPHH 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,170,438
Number of Sequences: 53049
Number of extensions: 278108
Number of successful extensions: 890
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -