Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28o05
(669 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase Wis1|Schizosaccha... 84 2e-17
SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase Byr1|Schizosacchar... 44 2e-05
SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1 |Schizosaccha... 43 3e-05
SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase Cdc2|Sch... 42 1e-04
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 39 7e-04
SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces po... 35 0.012
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 34 0.016
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 33 0.037
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 32 0.086
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 32 0.086
SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|ch... 30 0.35
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 29 0.61
SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomy... 29 0.80
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 29 0.80
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 27 1.8
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 2.4
SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase Gsk3|Schi... 27 2.4
SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase Byr2... 27 3.2
SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13 |Schizo... 27 3.2
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 3.2
SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 4.3
SPBC29A3.08 |pof4||elongin-A, F-box protein Pof4|Schizosaccharom... 26 4.3
SPBC18H10.15 |ppk23||serine/threonine protein kinase Ppk23|Schiz... 25 7.5
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 25 7.5
SPAC3H1.04c |mdm31||mitochondrial inner membrane protein Mdm31|S... 25 7.5
SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gc... 25 7.5
SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein s... 25 9.9
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 9.9
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 9.9
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 25 9.9
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 25 9.9
>SPBC409.07c |wis1|spc2, smf2|MAP kinase kinase
Wis1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 605
Score = 84.2 bits (199), Expect = 2e-17
Identities = 41/106 (38%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 338 TFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDV 517
+F ++ +++K+ +LG+G YG+V K H P+ MA+K I + + Q ++M+LD+
Sbjct: 312 SFRINMSEIIKLEELGKGNYGVVYKALHQPTGVTMALKEIRLSLEEATFNQ--IIMELDI 369
Query: 518 SMRASACPYTVHFYGAMFREGDVWICMEVMDM-SLDKFYTKVYKND 652
+ + PY V FYGA F EG V+ICME MD S+DK Y K++
Sbjct: 370 -LHKAVSPYIVDFYGAFFVEGSVFICMEYMDAGSMDKLYAGGIKDE 414
>SPAC1D4.13 |byr1|ste1, ste3|MAP kinase kinase
Byr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 44.0 bits (99), Expect = 2e-05
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 559
LG G G V ++H N MA K T + S QK++L +L V + PY V FY
Sbjct: 72 LGEGNGGAVSLVKH--RNIFMARK--TVYVGSDSKLQKQILRELGV-LHHCRSPYIVGFY 126
Query: 560 GAMFREGDVWICMEVMDM-SLD 622
GA + ++ +CME MD SLD
Sbjct: 127 GAFQYKNNISLCMEYMDCGSLD 148
>SPBC543.07 |pek1|skh1, mkk1|MAP kinase kinase Pek1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 43.2 bits (97), Expect = 3e-05
Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 559
LG G G V K R + I A+K + A N QK+LL +L ++ R+ PY V +Y
Sbjct: 85 LGEGVSGSVRKCRIRGTQMIFAMKTVLAAPNTAL--QKQLLRELKIN-RSCTSPYIVKYY 141
Query: 560 GAMFR--EGDVWICMEVMDM-SLDKFYTKV 640
GA + E + I ME SLD Y +V
Sbjct: 142 GACYNNAECQLNIAMEYCGAGSLDAIYKRV 171
>SPBC11B10.09 |cdc2|swo2|cyclin-dependent protein kinase
Cdc2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Frame = +2
Query: 368 KICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQ-----SLEQKRLLMDLDVSMRAS 532
K+ +G G YG+V K RH S I+A+K+I ++ ++ + LL +++ S
Sbjct: 6 KVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRS 65
Query: 533 ACPYTVHFYGAMFREGDVWICMEVMDMSLDKFYTKVYKNDRT 658
C V + E +++ E +DM L K+ ++ + T
Sbjct: 66 NC---VRLLDILHAESKLYLVFEFLDMDLKKYMDRISETGAT 104
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 38.7 bits (86), Expect = 7e-04
Identities = 22/85 (25%), Positives = 42/85 (49%)
Frame = +2
Query: 347 VHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMR 526
V D L + +G GAYG+V K + T+ AVK + N+ ++K +L + R
Sbjct: 13 VLGDSLRFVSIIGAGAYGVVYKAEDIYDGTLYAVKALCKDGLNEK-QKKLQARELALHAR 71
Query: 527 ASACPYTVHFYGAMFREGDVWICME 601
S+ PY + + + E +++ ++
Sbjct: 72 VSSHPYIITLHRVLETEDAIYVVLQ 96
>SPAC9G1.09 |sid1||PAK-related kinase Sid1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 471
Score = 34.7 bits (76), Expect = 0.012
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 341 FTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVS 520
+ ++A+ + LG G++G+V K R S I+A+K+I + ++ +V
Sbjct: 2 YPLNANSYTLLRKLGSGSFGVVWKARENVSGDIIAIKQIDLETGIDDITD----IEQEVF 57
Query: 521 MRASA-CPYTVHFYGAMFREGDVWICMEVMD 610
M ++ + +YG +WI ME MD
Sbjct: 58 MLSNCNSSNVIQYYGCFVDGYTLWILMEHMD 88
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 34.3 bits (75), Expect = 0.016
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Frame = +2
Query: 377 DLGRGAYGIVEKMRHLPS--NTIMAVKRITATFNNQSLEQKRLLMDLDV-----SMRASA 535
+LG+GAYGIV R++ S +A+K+IT F ++S+ KR L ++ + + R
Sbjct: 26 ELGQGAYGIVCAARNVASKDQEAVAIKKITNVF-SKSILTKRALREIKLLIHFRNHRNIT 84
Query: 536 CPYTVHFYGAMFREGDVWICMEVMDMSLD 622
C Y + + +V+I E+M+ L+
Sbjct: 85 CIYDLDIINP-YNFNEVYIYEELMEADLN 112
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 33.1 bits (72), Expect = 0.037
Identities = 20/76 (26%), Positives = 40/76 (52%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 559
+G+GA G V R + +N +A+K++ N Q +K +++ + M++ V+F
Sbjct: 392 IGQGASGDVYSARQVGTNLSVAIKKM--NINQQ--PKKEFIVNEILVMKSHHHKNIVNFI 447
Query: 560 GAMFREGDVWICMEVM 607
F + ++W+ ME M
Sbjct: 448 DTFFYKSELWMVMEYM 463
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 31.9 bits (69), Expect = 0.086
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +2
Query: 350 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRA 529
H D LVK LG+G YG V + ++ ++A+K + + Q E K +L + D+
Sbjct: 161 HFDLLVK---LGQGGYGSVWLAKKRNTHELLAMKMMKKSTLQQLNEVKHILNERDILTNT 217
Query: 530 SACPYTVHFYGAMFREGDVWICME 601
++ + V Y A + V++ ME
Sbjct: 218 NS-EWLVKLYYAFQDKEKVYLAME 240
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 31.9 bits (69), Expect = 0.086
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 2/167 (1%)
Frame = +2
Query: 125 HGSWLSNRFEGYLIRLFNKTDSCEVNTASTNGEMSRRKLPPPGFNFKTQTEQVVTPPGNL 304
HGS++S E ++L + C ++ + RR L P N+
Sbjct: 58 HGSYISP-LEAMTVKLADTYSICNPKFQFSSEQNPRRPLTKPSEGVHNHGFD------NV 110
Query: 305 DKQTTITVDDRTFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI--TATFNNQ 478
+ + V+D T + + LG G +G V + + L + I+A+K I F NQ
Sbjct: 111 NHDYVLYVNDLLGTDEGRKYLILDTLGHGTFGQVARCQDLKTQQIVAIKVIKNKPAFYNQ 170
Query: 479 SLEQKRLLMDLDVSMRASACPYTVHFYGAMFREGDVWICMEVMDMSL 619
+ + +L L+ + + Y + + + E++ ++L
Sbjct: 171 CVMEVSILELLNNKYDPEDKRHLIRLYDQFMHKNHLCLVFELLSINL 217
>SPAC31G5.09c |spk1||MAP kinase Spk1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 372
Score = 29.9 bits (64), Expect = 0.35
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRI 457
+G+GAYG+V H PS +AVK+I
Sbjct: 45 IGQGAYGVVCAALHKPSGLKVAVKKI 70
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 29.1 bits (62), Expect = 0.61
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 356 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI--TATFNNQSLEQKRLLMDLDVSMRA 529
+D I +G+GA+G V ++ L + I A+K + T F L + DL V
Sbjct: 91 EDFSTIKVIGKGAFGEVRLVQKLDTGKIYAMKSLLKTEMFKRDQLAHVKAERDLLVE--- 147
Query: 530 SACPYTVHFYGAMFREGDVWICMEVM 607
S P+ V Y A +++ ME +
Sbjct: 148 SDSPWVVSLYYAFQDSLYLYLIMEFL 173
>SPAC24B11.11c |sid2||Sid2p-Mob1p kinase complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 607
Score = 28.7 bits (61), Expect = 0.80
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +2
Query: 335 RTFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLD 514
RT H D I +G+G YG V R + I+A+K + + ++ E + +L + D
Sbjct: 200 RTRISHGD-FQTITQVGQGGYGSVWLARKRDTKEIVALKIMNKSVLHKMDEIRHVLTERD 258
Query: 515 VSMRASACPYTVHFYGAMFREGDVWICME 601
+ A++ + V A ++++ ME
Sbjct: 259 ILTTANS-EWLVRLLYAFQDTSNIYLAME 286
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 28.7 bits (61), Expect = 0.80
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 350 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQS 481
+ +D + LGRG +G V +R+ A+K+I +TF S
Sbjct: 167 YIEDFEEYSLLGRGGFGSVYHVRNKIDGAEYAMKKINSTFQQMS 210
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.5 bits (58), Expect = 1.8
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +2
Query: 296 GNLDKQTTITVDDRTFTVHADDLVKICDLGRGAYGIVEKMRHLPSN-TIMAVKRITATFN 472
G +K D F A + + C +GR + I E + H PSN T+ + I T
Sbjct: 326 GESEKDEKPDNTDVEFQTIAIEPLGDCIVGRERFKICEPIFHRPSNETVSLPEAIYITIK 385
Query: 473 NQSLEQKR 496
N + KR
Sbjct: 386 NYAANYKR 393
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 2.4
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 188 SCEVNTASTNGEMSRRKLPPPGFNFKTQTEQVVTPPGNLDK 310
S V + S G + P GFN K+ VV PG+ DK
Sbjct: 179 SMAVRSPSRLGNGPNVRSPKVGFNAKSDDSPVVKSPGSNDK 219
>SPAC1687.15 |gsk3|skp1|serine/threonine protein kinase
Gsk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRI--TATFNNQSLEQKRLL 502
+G G++G+V ++ + S++ A+KR+ F N+ L+ R++
Sbjct: 38 VGSGSFGVVMQVHLIESDSKAAIKRVLQDKRFKNRELQIMRIM 80
>SPBC1D7.05 |byr2|ste8, SPBC2F12.01|MAP kinase kinase kinase
Byr2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 659
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 284 VTPPGNLDKQTTITVDDRTFTVHADDL----VKICDLGRGAYGIVEKMRHLPSNTIMAVK 451
+ P + +T + D T DD ++ +G G++G V + S +MAVK
Sbjct: 364 IEQPSPISPTSTTSEDTNTLEEDTDDQSIKWIRGALIGSGSFGQVYLGMNASSGELMAVK 423
Query: 452 RITATFNNQSLEQKRLLMD 508
++ ++S ++ L+D
Sbjct: 424 QVILDSVSESKDRHAKLLD 442
>SPAC3H1.13 |ppk13||serine/threonine protein kinase Ppk13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 344
Score = 26.6 bits (56), Expect = 3.2
Identities = 9/37 (24%), Positives = 23/37 (62%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQ 490
LG G + V ++++ + + A+K+I +F N+ +++
Sbjct: 38 LGEGGFAFVYLVQNVSNEKLYALKKIKCSFGNKGIKK 74
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 338 TFTVHADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 457
T+T KI +G G YG V K + + ++A+KRI
Sbjct: 269 TYTYPKPAYEKIDQIGEGTYGKVYKAINTVTGDLVALKRI 308
>SPBC32F12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +2
Query: 515 VSMRASACPYTVHFYGAMFREGDVWICMEVMDMS 616
V+ +C F ++F++ +WIC +V D S
Sbjct: 96 VTFGVGSCLGITKFIYSIFKQTGIWICKQVADES 129
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 575 EGDVWICMEVMDMSLDKFYTKVYKNDRTI 661
E + WI + V + LD F TK+ + R I
Sbjct: 247 ESEFWILLSVAHVFLDAFTTKILRIVRPI 275
>SPBC29A3.08 |pof4||elongin-A, F-box protein
Pof4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 199
Score = 26.2 bits (55), Expect = 4.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 386 RGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACP 541
RG YG ++K R+ N A R T QS + KR ++ L+ RA+ P
Sbjct: 85 RGLYGKLKKKRNAHYNVASAKLRSAYTKLEQSKQNKR-IVPLEREPRAARPP 135
>SPBC18H10.15 |ppk23||serine/threonine protein kinase
Ppk23|Schizosaccharomyces pombe|chr 2|||Manual
Length = 398
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 356 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 457
DD + + G+YGIV + +NT++A+K+I
Sbjct: 72 DDYEILEKIEEGSYGIVYRGLDKSTNTLVALKKI 105
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 25.4 bits (53), Expect = 7.5
Identities = 18/86 (20%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 356 DDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASA 535
DD V + +G+G +G V +R + + A+K ++ + E + + D+ ++ SA
Sbjct: 264 DDFVPLKLIGKGTFGQVYLVRKKDTERVYAMKVLSKKVIVRRKEVAHTVGERDILVQTSA 323
Query: 536 C--PYTVHFYGAMFREGDVWICMEVM 607
P+ V + D+++ + M
Sbjct: 324 ADSPFIVALRFSFQTPKDLYLVTDYM 349
>SPAC3H1.04c |mdm31||mitochondrial inner membrane protein
Mdm31|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = +2
Query: 56 IIAYINALCTFIL*LC--NS*LSYNHGSW 136
IIAYIN+ TFI LC + LS GSW
Sbjct: 507 IIAYINSTRTFIPILCHVSKPLSDFDGSW 535
>SPBC36B7.09 |gcn2|ppk28, ppk28, SPBP18G5.01|eIF2 alpha kinase Gcn2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1576
Score = 25.4 bits (53), Expect = 7.5
Identities = 16/62 (25%), Positives = 33/62 (53%)
Frame = +2
Query: 380 LGRGAYGIVEKMRHLPSNTIMAVKRITATFNNQSLEQKRLLMDLDVSMRASACPYTVHFY 559
LGRG +G V K+++ AVK++ +++ E R+L ++ +++ + V +Y
Sbjct: 562 LGRGGFGEVVKVKNRIDGRFYAVKKLVLLSDDK--ENSRILREV-MTLSRLHHEHVVRYY 618
Query: 560 GA 565
A
Sbjct: 619 TA 620
>SPAC4F8.02c |mrpl40|SPAC644.02|mitochondrial ribosomal protein
subunit L40|Schizosaccharomyces pombe|chr 1|||Manual
Length = 279
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = -1
Query: 153 SKRFDNQDPWL*LSHELH--NYKINVH 79
+K DNQDP + ++HE+H N ++ H
Sbjct: 117 NKPEDNQDPVIDIAHEVHYANVRLLAH 143
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 422 LPSNTIMAVKRITATFNNQSLEQK---RLLMDLDVSMRASACPYTVHF 556
LP ++VK + T +++L +K LL + S+ ASA Y+ HF
Sbjct: 380 LPMGASISVKALVNTRCDKNLSEKGEKSLLDSAENSLPASANQYSTHF 427
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.0 bits (52), Expect = 9.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 231 LDISPLVLAVLTSQLSVLLNNRIKYPSK 148
LD+SP + L Q V +N R+ YP++
Sbjct: 465 LDLSPDKVIQLREQNGVAVNGRVCYPTR 492
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 25.0 bits (52), Expect = 9.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 90 SYNCVTRDLVTTTDPGYQIVLKDI*FDYLTKQTAVRLIRRVLTERCREENCRPRALT 260
SY V RD+ D ++ L I + L + +RLI++ + R + +C+P T
Sbjct: 170 SYPAVMRDVAELKDDNERLNLDTIKRNALVELKKLRLIKQQESLRHQVMHCQPHLRT 226
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 25.0 bits (52), Expect = 9.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 350 HADDLVKICDLGRGAYGIVEKMRHLPSNTIMAVKRI 457
+A D ++ LG+G YG V K R+ A+K+I
Sbjct: 220 YASDFEELELLGKGGYGSVYKARNKFDGVEYALKKI 255
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,829,356
Number of Sequences: 5004
Number of extensions: 59318
Number of successful extensions: 222
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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