Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28n20
(177 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 24 0.19
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 19 5.5
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 19 5.5
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 19 5.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 19 7.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 19 7.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 19 7.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 19 7.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 19 7.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 19 7.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 19 7.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 19 7.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 19 7.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 19 7.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 18 9.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 18 9.6
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 18 9.6
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor
protein.
Length = 53
Score = 23.8 bits (49), Expect = 0.19
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 22 RCFPQFTNRGPAHTLIKW 75
R FP F +GP + IKW
Sbjct: 32 RPFPTFPGQGPFNPKIKW 49
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 19.0 bits (37), Expect = 5.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 25 CFPQFTNR 48
CFP+ TNR
Sbjct: 178 CFPRATNR 185
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.0 bits (37), Expect = 5.5
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -1
Query: 150 GVNGKRSHG*IPMHWTDQV 94
G R H IP H+ +Q+
Sbjct: 320 GRGRSREHRIIPSHYIEQI 338
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 19.0 bits (37), Expect = 5.5
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -2
Query: 104 LIR*KTLLKPHLMSVCAGP 48
L+R KTL+K ++++ A P
Sbjct: 90 LVRTKTLVKNAIVTIDATP 108
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 77 REHRIIPSHYIEQI 90
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 18.6 bits (36), Expect = 7.3
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 17 LTDVFHSLRTE 49
LTDVFH T+
Sbjct: 417 LTDVFHVQETD 427
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 310 REHRIIPSHYIEQI 323
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 135 RSHG*IPMHWTDQV 94
R H IP H+ +Q+
Sbjct: 326 REHRIIPSHYIEQI 339
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = +1
Query: 94 HLISPMHGDSSMRSLTIDT 150
H+ S HG + ++ ++DT
Sbjct: 176 HIASWSHGSNEIKLNSLDT 194
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.2 bits (35), Expect = 9.6
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 134 DLMDESPCIGLIR 96
D +DE+ +GLIR
Sbjct: 324 DRVDETTFLGLIR 336
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -1
Query: 108 WTDQVKDLTETPLNE 64
W D VKD P+ +
Sbjct: 151 WVDPVKDDKGNPIKD 165
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,064
Number of Sequences: 438
Number of extensions: 932
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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