Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28n17
         (684 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063855-1|AAH63855.1| 1105|Homo sapiens ATF7IP protein protein.       30   6.7  
BC025276-1|AAH25276.2|  556|Homo sapiens UTP18, small subunit (S...    30   6.7  
AY337596-1|AAQ92978.1| 1270|Homo sapiens SETDB1-associated prote...    30   6.7  
AF425650-1|AAO91864.1| 1270|Homo sapiens MBD1-containing chromat...    30   6.7  
AF151806-1|AAD34043.1|  521|Homo sapiens CGI-48 protein protein.       30   6.7  

>BC063855-1|AAH63855.1| 1105|Homo sapiens ATF7IP protein protein.
          Length = 1105

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 484 KTKSNDRLNNENTSTDYDTEDEERVNTFN--SRKRRVVAKRAFNSKSKKNSYRQSGVDAA 657
           + +SN++ N          ED+ER +  N  SR++R  ++   N +SK+  Y +   +A 
Sbjct: 520 EVESNEKDNRPEEEEQVIHEDDERPSEKNEFSRRKRSKSEDMDNVQSKRRRYMEEEYEAE 579

Query: 658 *TIKTTHK 681
             +K T K
Sbjct: 580 FQVKITAK 587


>BC025276-1|AAH25276.2|  556|Homo sapiens UTP18, small subunit (SSU)
           processome component, homolog (yeast) protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 529 DYDTEDEERVNTFNSRKRRVVAKRAFNSKSKKNSYRQ 639
           D + EDEE V+  N+R R+ + K A  SK  K++ ++
Sbjct: 144 DEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKK 180


>AY337596-1|AAQ92978.1| 1270|Homo sapiens SETDB1-associated protein
           protein.
          Length = 1270

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 484 KTKSNDRLNNENTSTDYDTEDEERVNTFN--SRKRRVVAKRAFNSKSKKNSYRQSGVDAA 657
           + +SN++ N          ED+ER +  N  SR++R  ++   N +SK+  Y +   +A 
Sbjct: 521 EVESNEKDNRPEEEEQVIHEDDERPSEKNEFSRRKRSKSEDMDNVQSKRRRYMEEEYEAE 580

Query: 658 *TIKTTHK 681
             +K T K
Sbjct: 581 FQVKITAK 588


>AF425650-1|AAO91864.1| 1270|Homo sapiens MBD1-containing chromatin
           associated factor protein.
          Length = 1270

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 484 KTKSNDRLNNENTSTDYDTEDEERVNTFN--SRKRRVVAKRAFNSKSKKNSYRQSGVDAA 657
           + +SN++ N          ED+ER +  N  SR++R  ++   N +SK+  Y +   +A 
Sbjct: 521 EVESNEKDNKPEEEEQVIHEDDERPSEKNEFSRRKRSKSEDMDNVQSKRRRYMEEEYEAE 580

Query: 658 *TIKTTHK 681
             +K T K
Sbjct: 581 FQVKITAK 588


>AF151806-1|AAD34043.1|  521|Homo sapiens CGI-48 protein protein.
          Length = 521

 Score = 30.3 bits (65), Expect = 6.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +1

Query: 529 DYDTEDEERVNTFNSRKRRVVAKRAFNSKSKKNSYRQ 639
           D + EDEE V+  N+R R+ + K A  SK  K++ ++
Sbjct: 120 DEEDEDEEMVDMMNNRFRKDMMKNASESKLSKDNLKK 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,090,473
Number of Sequences: 237096
Number of extensions: 1165759
Number of successful extensions: 2530
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2530
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)