Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28n13
         (347 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   3.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.2  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.2  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    20   7.3  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    20   9.6  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    20   9.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   9.6  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 253 VTELLRQWEEQHTQPNYDPI 312
           +T L R  +  HT+P+ +PI
Sbjct: 15  LTRLRRHIQNVHTRPSKEPI 34


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 63  IYKYRYIFDFIN 28
           IYKY+YI + +N
Sbjct: 318 IYKYKYIREIMN 329


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 63  IYKYRYIFDFIN 28
           IYKY+YI + +N
Sbjct: 318 IYKYKYIREIMN 329


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 306 IVIWLRMLFLPLPQ 265
           IVIWL  L L +PQ
Sbjct: 176 IVIWLLALCLAVPQ 189


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 217 FYN*SVFLTSLSYQLFVICLERQFIHVTYLYFIKKLSQNLL 95
           FY  S+ L + S  L  I    Q +HV    +I  +++++L
Sbjct: 309 FYEKSLALAAFSLMLTSILRYLQELHVDAPTWISSVTESVL 349


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -1

Query: 299 FGCVCCSSHCLNSSV 255
           F C  CS  C+N S+
Sbjct: 17  FKCEKCSYSCVNKSM 31


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 244 AQEVTELLRQW 276
           AQEV E LR W
Sbjct: 180 AQEVHEKLRNW 190


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 46  IPIFVNLIIYMKKYNLXVN 102
           IP+ V L  Y + YN  V+
Sbjct: 258 IPMLVMLFFYWRIYNAAVS 276


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,398
Number of Sequences: 438
Number of extensions: 1834
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)