Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28n11
         (113 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   1.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   1.8  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    19   5.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    19   5.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    19   7.4  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    19   7.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    18   9.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 86  LITKYLRRYD 57
           + TKYLRRY+
Sbjct: 112 IATKYLRRYE 121


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 86  LITKYLRRYD 57
           + TKYLRRY+
Sbjct: 127 IATKYLRRYE 136


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
          protein.
          Length = 128

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = -1

Query: 92 VYLITKYLRRYDYVP-----NSERLIN 27
          V+   KY  +YD V      N+ERL+N
Sbjct: 18 VFSEDKYTTKYDNVDIDVVLNTERLLN 44


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
          protein.
          Length = 128

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = -1

Query: 92 VYLITKYLRRYDYVP-----NSERLIN 27
          V+   KY  +YD V      N+ERL+N
Sbjct: 18 VFSEDKYTTKYDNVDIDVVLNTERLLN 44


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 65  RYDYVPNSERLIND 24
           RYD VP+S  +I++
Sbjct: 86  RYDGVPSSLNVISE 99


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
          finger domain-Z2 isoform protein.
          Length = 71

 Score = 18.6 bits (36), Expect = 7.4
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = +2

Query: 8  TCVYCSHLLISRYLEHNHIA 67
          TC  C  +L S+     H+A
Sbjct: 7  TCQLCGKVLCSKASLKRHVA 26


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 50  PNSERLINDCSRRK 9
           PN E +  D  RRK
Sbjct: 196 PNDEGIETDSDRRK 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,651
Number of Sequences: 438
Number of extensions: 246
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 18
effective length of database: 138,459
effective search space used:  2630721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)