Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28n08
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119234-1|AAM51094.1|  167|Drosophila melanogaster SD18306p pro...   181   6e-46
AE013599-953|AAM71037.1|  167|Drosophila melanogaster CG30010-PA...   181   6e-46
AE014296-1411|AAF50453.2|  345|Drosophila melanogaster CG7201-PA...    30   2.7  

>AY119234-1|AAM51094.1|  167|Drosophila melanogaster SD18306p
           protein.
          Length = 167

 Score =  181 bits (441), Expect = 6e-46
 Identities = 83/161 (51%), Positives = 111/161 (68%)
 Frame = +3

Query: 78  LFLDDARIKNFTSCXXXXXXXXXXXXRIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLPI 257
           LFLDDA++KNFTSC            R+RLNKT +YE+EFP++S CGRERN+IRCDD P+
Sbjct: 2   LFLDDAKMKNFTSCFKEKDFLKFFFNRLRLNKTSRYESEFPYISLCGRERNFIRCDDTPV 61

Query: 258 VFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIKSKLA 437
           VFT    +D+ + LSY +AG +L   + P K+YM P  GRVYH A  + GG+GL++SKLA
Sbjct: 62  VFTEQLRKDDTEVLSYAHAGQVLTLPYEPHKLYMDPRNGRVYHPAAPQVGGIGLVRSKLA 121

Query: 438 IELSKYFEFHNGDMRPPTHLTWHNKKYELDLNWFDENVKRF 560
           IELS++FEF  G+   PTH  W+ ++ EL   W + N +RF
Sbjct: 122 IELSQHFEFLAGE-ASPTHFQWNGERLELQNEWVN-NTQRF 160


>AE013599-953|AAM71037.1|  167|Drosophila melanogaster CG30010-PA
           protein.
          Length = 167

 Score =  181 bits (441), Expect = 6e-46
 Identities = 83/161 (51%), Positives = 111/161 (68%)
 Frame = +3

Query: 78  LFLDDARIKNFTSCXXXXXXXXXXXXRIRLNKTGKYEAEFPFVSHCGRERNYIRCDDLPI 257
           LFLDDA++KNFTSC            R+RLNKT +YE+EFP++S CGRERN+IRCDD P+
Sbjct: 2   LFLDDAKMKNFTSCFKEKDFLKFFFNRLRLNKTSRYESEFPYISLCGRERNFIRCDDTPV 61

Query: 258 VFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIKSKLA 437
           VFT    +D+ + LSY +AG +L   + P K+YM P  GRVYH A  + GG+GL++SKLA
Sbjct: 62  VFTEQLRKDDTEVLSYAHAGQVLTLPYEPHKLYMDPRNGRVYHPAAPQVGGIGLVRSKLA 121

Query: 438 IELSKYFEFHNGDMRPPTHLTWHNKKYELDLNWFDENVKRF 560
           IELS++FEF  G+   PTH  W+ ++ EL   W + N +RF
Sbjct: 122 IELSQHFEFLAGE-ASPTHFQWNGERLELQNEWVN-NTQRF 160


>AE014296-1411|AAF50453.2|  345|Drosophila melanogaster CG7201-PA
           protein.
          Length = 345

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 22/69 (31%), Positives = 33/69 (47%)
 Frame = +3

Query: 246 DLPIVFTHIFHEDNVDFLSYGYAGDLLRTVFIPDKVYMLPLTGRVYHVAEEKFGGVGLIK 425
           +LP    HIFH      L YG   D L T  +  K  +L     ++  + EKFG  G + 
Sbjct: 192 ELPAGLQHIFHGGE-RVLLYGVVEDFLSTFGMDGKACLLRTICEMHSRSLEKFGVFGEM- 249

Query: 426 SKLAIELSK 452
           +KL + ++K
Sbjct: 250 TKLFLTVTK 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,008,008
Number of Sequences: 53049
Number of extensions: 484622
Number of successful extensions: 964
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)