Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28m23
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q04719 Cluster: Early 53 kDa protein; n=5; Nucleopolyhe... 266 3e-70
UniRef50_O10368 Cluster: Early 53 kDa protein; n=8; Nucleopolyhe... 116 7e-25
UniRef50_Q9YMV1 Cluster: LdOrf-23 peptide; n=1; Lymantria dispar... 46 7e-04
UniRef50_Q9IBR3 Cluster: ORF7 me53; n=3; Nucleopolyhedrovirus|Re... 44 0.003
UniRef50_A0EYR6 Cluster: Major early-transcribed protein 53; n=1... 42 0.011
UniRef50_Q8QLM7 Cluster: Me53; n=3; Nucleopolyhedrovirus|Rep: Me... 42 0.015
UniRef50_Q6EBB9 Cluster: Major early-transcribed protein 53; n=3... 40 0.045
UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing... 38 0.18
UniRef50_Q0RVG8 Cluster: 3-hydroxyacyl-CoA dehydrogenase; n=1; R... 35 1.7
UniRef50_Q24C08 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q0N486 Cluster: ME-53; n=1; Clanis bilineata nucleopoly... 34 3.9
UniRef50_A6SBC0 Cluster: Predicted protein; n=1; Botryotinia fuc... 34 3.9
UniRef50_Q3ELA5 Cluster: CgeB protein; n=1; Bacillus thuringiens... 33 6.8
UniRef50_Q5A0C3 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
>UniRef50_Q04719 Cluster: Early 53 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Early 53 kDa protein -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 449
Score = 266 bits (653), Expect = 3e-70
Identities = 127/155 (81%), Positives = 132/155 (85%)
Frame = +2
Query: 2 IQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFS 181
IQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPD DDVNCFILQEPSEMMAALQDNRFS
Sbjct: 285 IQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDVVDDVNCFILQEPSEMMAALQDNRFS 344
Query: 182 GIKGTVFATVKVKKFTEVLDGGAITFPSRPTIXXXXXXXXXXXXXXXXPVLYCTKCGFTN 361
GIKGTVFATVKVKKFT+VLD GAITFP +PT PVLYCTKCGFTN
Sbjct: 345 GIKGTVFATVKVKKFTQVLD-GAITFPLKPTTNNYCKLCKKTKLYYKNPVLYCTKCGFTN 403
Query: 362 VYHFPEYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
VYHFPEYSK +YY +AIK+FEMHNEMIIYYDLKMY
Sbjct: 404 VYHFPEYSKFMYYFEAIKSFEMHNEMIIYYDLKMY 438
>UniRef50_O10368 Cluster: Early 53 kDa protein; n=8;
Nucleopolyhedrovirus|Rep: Early 53 kDa protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 455
Score = 116 bits (278), Expect = 7e-25
Identities = 64/159 (40%), Positives = 87/159 (54%), Gaps = 4/159 (2%)
Frame = +2
Query: 2 IQTIDLSTTGGLVLRETYTNIVLQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFS 181
I +I L TTGG+VL+E N+ L RYR++ P A+DDVNCF + SE+M AL F
Sbjct: 281 IVSITLRTTGGVVLKEINHNVRLMRYRNIYKEPTASDDVNCFTVSSSSELMKALDSGAFD 340
Query: 182 GIKGTVFATVKVKKFTEVLDGGAITFPSRPTIXXXXXXXXXXXXXXXXPVLYCTKCGFTN 361
I+GTVFA + E + G ITFP RP PVL C+KCGFTN
Sbjct: 341 SIQGTVFAEIYGFAIQEFVT-GVITFPVRPVKGNYCAVCKKNKMYYSNPVLCCSKCGFTN 399
Query: 362 VYHF-PEYSKLVYYSKAIK---NFEMHNEMIIYYDLKMY 466
Y F +Y L ++ +A++ H E + YY+LK++
Sbjct: 400 RYIFNGKYDDLYFHPEAVQTHATHSTHGEFVRYYNLKLH 438
>UniRef50_Q9YMV1 Cluster: LdOrf-23 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-23 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 342
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Frame = +2
Query: 326 PVLYCTKCGFTN-VYHFP------EYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
P+LYC++CGF N +Y P +Y LVY + ++ + + IIYYDL MY
Sbjct: 283 PILYCSRCGFMNRIYFKPSQRNELDYPSLVYLQRCVQAVKTASYCIIYYDLNMY 336
>UniRef50_Q9IBR3 Cluster: ORF7 me53; n=3; Nucleopolyhedrovirus|Rep:
ORF7 me53 - Spodoptera exigua MNPV
Length = 390
Score = 44.4 bits (100), Expect = 0.003
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = +2
Query: 194 TVFATVKVKKFTEVLDGGAITFPSRPTIXXXXXXXXXXXXXXXXPVLYCTKCGFTNVYHF 373
T F TV + + D A+ FP + I PVLYC+KCGFT+ F
Sbjct: 266 TYFYTVTKRVYLSFFDY-AVCFPIK-CINYCKMCKQDKLYFKINPVLYCSKCGFTDASFF 323
Query: 374 ---PEYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
P V+ +K +K + I YYD+ +Y
Sbjct: 324 KNAPFLKNTVFLAKCVKAKTLPPTRIYYYDMNLY 357
>UniRef50_A0EYR6 Cluster: Major early-transcribed protein 53; n=1;
Ecotropis obliqua NPV|Rep: Major early-transcribed
protein 53 - Ecotropis obliqua NPV
Length = 450
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +2
Query: 326 PVLYCTKCGFTNVYHFP------EYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
P+L+C+KCGF N HF + + +Y + +K + I+YYD+K+Y
Sbjct: 380 PILFCSKCGFINRMHFNKNIDNLDCDTINFYQECVKAVKTRLFCIVYYDMKLY 432
>UniRef50_Q8QLM7 Cluster: Me53; n=3; Nucleopolyhedrovirus|Rep: Me53
- Mamestra configurata NPV-A
Length = 354
Score = 41.9 bits (94), Expect = 0.015
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +2
Query: 326 PVLYCTKCGFTNVYHFPE---YSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
P++YCTKCGFT+ F + + + YY + + + + I YYDL +Y
Sbjct: 296 PIMYCTKCGFTDALFFRDSNIINGIKYYKQCVVEKTKNLKCIRYYDLDLY 345
>UniRef50_Q6EBB9 Cluster: Major early-transcribed protein 53; n=3;
Nucleopolyhedrovirus|Rep: Major early-transcribed
protein 53 - Trichoplusia ni SNPV
Length = 382
Score = 40.3 bits (90), Expect = 0.045
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +2
Query: 329 VLYCTKCGFTNVYHFP----EYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
VLYC++CGFT+ F + S L +YS +K + + I YYD+ +Y
Sbjct: 328 VLYCSQCGFTDAMFFTRNKLDVSALKFYSVCVKVKTIKPKRIYYYDMNLY 377
>UniRef50_P24655 Cluster: Uncharacterized Bro-N domain-containing
protein ORF2; n=12; Nucleopolyhedrovirus|Rep:
Uncharacterized Bro-N domain-containing protein ORF2 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 328
Score = 38.3 bits (85), Expect = 0.18
Identities = 23/37 (62%), Positives = 25/37 (67%), Gaps = 6/37 (16%)
Frame = -3
Query: 611 EQPRRQDGSTSNSVVKR*------PHTVLITKSGLIQ 519
EQ + G TSNSVVKR PHTVLITKSG+IQ
Sbjct: 61 EQTIQNGGPTSNSVVKRGDPLYLQPHTVLITKSGVIQ 97
>UniRef50_Q0RVG8 Cluster: 3-hydroxyacyl-CoA dehydrogenase; n=1;
Rhodococcus sp. RHA1|Rep: 3-hydroxyacyl-CoA
dehydrogenase - Rhodococcus sp. (strain RHA1)
Length = 288
Score = 35.1 bits (77), Expect = 1.7
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 68 LQRYRSMCTRPDAADDVNCFILQEPSEMMAALQDNRFSGIKGTVFATVKVKKFTEVL 238
L ++++C + D++C I PSE++AA++D R GT F T + TEVL
Sbjct: 219 LDTWKALCAK--LFPDLSCEI-STPSELIAAVEDGRLGAKSGTGFYTHTPDEITEVL 272
>UniRef50_Q24C08 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 548
Score = 34.3 bits (75), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 335 YCTKCGFTNVYHFPEYSKLVYYSKAIKNFEMH 430
YC C F N Y + +Y L+YY ++F H
Sbjct: 513 YCKACKFLNRYIYEDYDSLIYYCNMCQDFTEH 544
>UniRef50_Q0N486 Cluster: ME-53; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: ME-53 - Clanis bilineata
nucleopolyhedrosis virus
Length = 389
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +2
Query: 329 VLYCTKCGFTNVYHFP------EYSKLVYYSKAIKNFEMHNEMIIYYDLKMY 466
VLYC+ CGF N HF + + + ++ + + ++YYD MY
Sbjct: 318 VLYCSTCGFMNRLHFTINEDKIDLNSVKFFEPCVMAVKTKTHCLLYYDNNMY 369
>UniRef50_A6SBC0 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 540
Score = 33.9 bits (74), Expect = 3.9
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = -2
Query: 270 GLEGNVIAPPSNTSVNFLTLTVANTVPLIPENRLSCRAAIISLGS*SIKQLTS 112
G G+ PS++ V+ T T A +PE+ L+ +A+ ISL S ++ L S
Sbjct: 49 GTSGSQAGSPSSSQVSLQTTTFAPLPTSLPESSLTAKASSISLDSSTLSSLNS 101
>UniRef50_Q3ELA5 Cluster: CgeB protein; n=1; Bacillus thuringiensis
serovar israelensis ATCC 35646|Rep: CgeB protein -
Bacillus thuringiensis serovar israelensis ATCC 35646
Length = 325
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 335 YCTKCGFTNVYHFPEYSKLVYYSKAIKNFEMHNEMI 442
Y T G+TNVYH P + + + ++KN + +E++
Sbjct: 113 YYTALGYTNVYHLPLATNIDVFKPSLKNIKYKSEVL 148
>UniRef50_Q5A0C3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 573
Score = 33.1 bits (72), Expect = 6.8
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = -1
Query: 271 RSRRKRDCAAVQYLGKFFDFNSGKHGSFDTRKSVVLQSGHHFAWLLK-YKTINVVRRVGS 95
R R + + +Y+ KF G H DT + L+ H+ WL+K +K I+ R++
Sbjct: 292 RQLRSEEMSIFKYMNKF-SIKVGDHDILDTCLEISLKYNAHYHWLVKFFKVISPRRKISV 350
Query: 94 GAHASV 77
+ V
Sbjct: 351 NSKIQV 356
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,521,944
Number of Sequences: 1657284
Number of extensions: 10094892
Number of successful extensions: 22520
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22504
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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