Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28m23
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 25 0.53
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.8
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 4.9
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 4.9
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 4.9
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 22 4.9
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 8.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.6
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.6
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.6
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 25.4 bits (53), Expect = 0.53
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -1
Query: 259 KRDCAAVQYLGKFFDFNSGKHGSFDTRKSVVLQSGHH 149
K + V+Y K+FD+N G D ++ +QSG +
Sbjct: 28 KANIFQVKYQWKYFDYNFGS----DEKRQAAIQSGEY 60
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
Frame = -1
Query: 190 FDTRKSVVLQS---GHHFAWLLKYKTI 119
F KSV Q+ +H+ WL K KTI
Sbjct: 125 FKNAKSVTFQTMTIPNHYLWLYKDKTI 151
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 353 FTNVYHFPEYSKLVYYSKAIKNFE 424
++N ++ Y+K +YY I N E
Sbjct: 91 YSNYNNYNNYNKKLYYKNYIINIE 114
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 339 VPNAGLPTFIIFLNTLNLCTILKRS 413
+P + L TF+ + + +NL + +RS
Sbjct: 303 IPESDLVTFLCYPSVMNLDDLTRRS 327
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 365 YHFPEYSKLVYYSKAIKNFE 424
Y++ Y+K +YY I N E
Sbjct: 331 YNYNNYNKKLYYKNYIINIE 350
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 339 VPNAGLPTFIIFLNTLNLCTILKRS 413
+P + L TF+ + + +NL + +RS
Sbjct: 303 IPESDLVTFLCYPSVMNLDDLTRRS 327
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 371 FPEYSKLVYYSK-AIKNFEMHNEMIIYYDLKM 463
F E + Y S+ AI F +H I+Y DLK+
Sbjct: 82 FKEPVAVFYASEIAIGLFFLHGRGIVYRDLKL 113
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +1
Query: 55 HQYSVAALPKHVHQT 99
H +S AA P H H T
Sbjct: 432 HHHSHAATPHHQHST 446
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 326 PVLYCTKCGFTNVYHFPEYS 385
P+ T G N H PEYS
Sbjct: 160 PITKLTAMGVLNNLHDPEYS 179
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 326 PVLYCTKCGFTNVYHFPEYS 385
P+ T G N H PEYS
Sbjct: 160 PITKLTAMGVLNNLHDPEYS 179
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 326 PVLYCTKCGFTNVYHFPEYS 385
P+ T G N H PEYS
Sbjct: 160 PITKLTAMGVLNNLHDPEYS 179
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,351
Number of Sequences: 438
Number of extensions: 3347
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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