Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28m22
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 193 1e-49
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 156 1e-38
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 52 4e-07
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 47 1e-05
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 47 1e-05
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 47 1e-05
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 46 3e-05
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 46 3e-05
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 42 5e-04
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 39 0.003
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 37 0.017
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 37 0.017
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 37 0.017
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 35 0.069
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 35 0.069
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 34 0.12
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 33 0.16
AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 33 0.16
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 33 0.16
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 33 0.28
U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 29 3.4
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 193 bits (471), Expect = 1e-49
Identities = 108/212 (50%), Positives = 140/212 (66%), Gaps = 36/212 (16%)
Frame = +2
Query: 212 MGAN-ISQLERDIGSEQFP--PNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKA 382
MGA SQLE++I + + NEHY+GLVNFGNTCY NSV+QAL+FCRPFREKVL YK
Sbjct: 1 MGATGSSQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQ 60
Query: 383 KNKRT---KETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEF 553
K++ K+ L+TCLADLF+SIA+QK++VG+IAPK+FI +L+KE E FDNYMQQDAHEF
Sbjct: 61 TLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEF 120
Query: 554 LNFLINHINEIILAERNQSTLKVQKNNSGE--NVTCN-----GSVPHNTE---------- 682
N+LIN I+E ++ E+ K ++ + + NVT N +P + E
Sbjct: 121 FNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGI 180
Query: 683 -------------PTWVHEIFQGTLTSETRCL 739
TW+HEIFQG LT+ETRCL
Sbjct: 181 TVEGNEFLNKSDTTTWIHEIFQGILTNETRCL 212
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 156 bits (379), Expect = 1e-38
Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 36/212 (16%)
Frame = +2
Query: 212 MGAN-ISQLERDIGSEQFP--PNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKA 382
MGA SQLE++I + + NEHY+GLVN AL+FCRPFREKVL YK
Sbjct: 1 MGATGSSQLEKEISTTESVNNANEHYYGLVN------------ALFFCRPFREKVLNYKQ 48
Query: 383 KNKRT---KETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEF 553
K++ K+ L+TCLADLF+SIA+QK++VG+IAPK+FI +L+KE E FDNYMQQDAHEF
Sbjct: 49 TLKKSGASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEF 108
Query: 554 LNFLINHINEIILAERNQSTLKVQKNNSGE--NVTCN-----GSVPHNTE---------- 682
N+LIN I+E ++ E+ K ++ + + NVT N +P + E
Sbjct: 109 FNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDEKGTSERNGGI 168
Query: 683 -------------PTWVHEIFQGTLTSETRCL 739
TW+HEIFQG LT+ETRCL
Sbjct: 169 TVEGNEFLNKSDTTTWIHEIFQGILTNETRCL 200
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 63.7 bits (148), Expect = 1e-10
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCLADL--FYS 439
G +NFGNTCY N+VLQ L C PF + ++E + + +T + DL YS
Sbjct: 183 GYLNFGNTCYMNAVLQLLGHCSPFTQYLIELIPPGGWSNCSHDIPKTAIQMALDLRNMYS 242
Query: 440 IATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEII--LAERNQST 613
+ ++P K I +R E F+ + QQDA EF+ L++ ++ + +E +++
Sbjct: 243 ----DFPLPYLSPWKIITCVRNEMPGFECFQQQDASEFMRNLLDILDRDLKTCSEYHRTN 298
Query: 614 LKVQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRC 736
++ N + + PH T + IFQG L ++ +C
Sbjct: 299 TLIEMGNPEMDYAIAMNAPHT--KTAISAIFQGVLENQIQC 337
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 54.8 bits (126), Expect = 6e-08
Identities = 42/163 (25%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Frame = +2
Query: 278 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLE--YKAKNKRTKET-----LLTCLADLFY 436
Y GL N GNTC+ N+VLQ L RE L Y+ + T L AD +
Sbjct: 422 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 481
Query: 437 SIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTL 616
+ + +K +I P + + ++ +F N+ Q DAHEFL+FL++ ++E + + +
Sbjct: 482 QMWSGHQK--AIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPLT 539
Query: 617 KVQKNNSGENVTCNGSVPHN---TEPTWVHEIFQGTLTSETRC 736
+++ ++ + N + ++F G L S +C
Sbjct: 540 GTVESHGRHDLDVSNEAWKNHILRNDSIFVDLFHGQLKSHVQC 582
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 52.0 bits (119), Expect = 4e-07
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 463
GL N GNTC+ S Q L P RE L +N ++ L L ++ K +
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGM 335
Query: 464 -----GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINE 583
SI P+KF + + + F+ Y QQDAHE + ++++ ++E
Sbjct: 336 WSGDYASINPRKFKSIIGQFAPRFNGYSQQDAHELMAYVLDGLHE 380
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 439
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 627
Query: 440 IATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS 610
+ KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 628 MWAAKKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKS 681
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 439
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 571 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 630
Query: 440 IATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS 610
+ KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 631 MWAAKKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKS 684
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 47.2 bits (107), Expect = 1e-05
Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 439
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 627
Query: 440 IATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQS 610
+ KKK +IAP F +R + F+ Q D EF+ FL++ ++ + E N+S
Sbjct: 628 MWAAKKK--NIAPNDFNDAIRLSSDMFECSEQHDCQEFVAFLLDQLH-TSMYESNKS 681
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 454
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 455 KKVGS----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEI 586
+ + S I P I L +F+ + QQDA+E L +++++ I
Sbjct: 159 RALRSKGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRI 206
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 454
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 455 KKVGS----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEI 586
+ + S I P I L +F+ + QQDA+E L +++++ I
Sbjct: 159 RALRSKGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRI 206
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 46.0 bits (104), Expect = 3e-05
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 454
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 455 KKVGS----IAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEI 586
+ + S I P I L +F+ + QQDA+E L +++++ I
Sbjct: 159 RALRSKGEPIKPFAAILTLSDSFPQFEKFKQQDANECLVSIMSNVTRI 206
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 463
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
Query: 464 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI 577
+ + + ++ D + Q D EF L++++
Sbjct: 254 ETNSLTRAFG-----WDKLDAFNQHDVQEFCRVLLDNL 286
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 463
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
Query: 464 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI 577
+ + + ++ D + Q D EF L++++
Sbjct: 254 ETNSLTRAFG-----WDKLDAFNQHDVQEFCRVLLDNL 286
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/98 (25%), Positives = 45/98 (45%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 463
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
Query: 464 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHI 577
+ + + ++ D + Q D EF L++++
Sbjct: 254 ETNSLTRAFG-----WDKLDAFNQHDVQEFCRVLLDNL 286
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 41.9 bits (94), Expect = 5e-04
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 10/109 (9%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVL------EYKAKNKRTKETLLTC-LADLFYSI 442
G+ N GNTC+ N+VLQAL FRE ++ +Y K K C L D + +
Sbjct: 379 GMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCYLTDEYRKL 438
Query: 443 ATQKKKVG---SIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHIN 580
+ AP +F F + Q D+HEF+ + ++ ++
Sbjct: 439 LISQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLH 487
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 22/122 (18%)
Frame = +2
Query: 287 LVNFGNTCYSNSVLQALYFCRPFR----------EKVLEYKAKNKRTKETL---LTCLAD 427
LVN GN+C+ NS +QAL C F K ++Y E L L D
Sbjct: 147 LVNTGNSCFLNSTMQALSSCHSFALRCEQLYCLVRKNIDYFDNEASHSEVLCRKYRVLID 206
Query: 428 LFYSIA--TQKKKVGSIAPKKFIARLRKEKE-------EFDNYMQQDAHEFLNFLINHIN 580
+A T++ P+ A L+ +E +F N QQDAHEFL L I+
Sbjct: 207 FLKIMAALTKRSNSSKTQPEIIEANLQTFRELIGMIRNDFANKNQQDAHEFLLMLFEAID 266
Query: 581 EI 586
++
Sbjct: 267 DV 268
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 38.3 bits (85), Expect = 0.006
Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Frame = +2
Query: 278 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLAD-LFYSIATQK 454
Y GLVN G++CY NSVLQAL F+ + ++ ETL+ C D L Q
Sbjct: 318 YTGLVNTGSSCYMNSVLQALVTVDSFQTRY------GEQGLETLVNCPLDKLHNDFNAQF 371
Query: 455 KKV-----------------GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINE 583
KV I P +F +F QQD E++ FL I E
Sbjct: 372 SKVVRAMLSGDYSSEMDPTNNHIKPLQFKRVAAGNHRDFSTSKQQDVEEYIRFLFEKIAE 431
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +2
Query: 269 NEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLA 424
N+ GL+N GN CY NS LQ + FR+ + +++ + + + L
Sbjct: 104 NDQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQ 163
Query: 425 DLFYSIAT 448
D+FY++ T
Sbjct: 164 DIFYTLQT 171
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 8/68 (11%)
Frame = +2
Query: 269 NEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLA 424
N+ GL+N GN CY NS LQ + FR+ + +++ + + + L
Sbjct: 104 NDQPAGLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQ 163
Query: 425 DLFYSIAT 448
D+FY++ T
Sbjct: 164 DIFYTLQT 171
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +2
Query: 269 NEH-YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK 379
N H Y GLVN TCY NS++Q+LY FR + +++
Sbjct: 83 NGHRYVGLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 34.7 bits (76), Expect = 0.069
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
Frame = +2
Query: 287 LVNFGNTCYSNSVLQALYFC-----------RPFREKVLEYKAKNKRTKETLL-TCL--- 421
L N GN+CY NS +QAL C R LE + + R K + +CL
Sbjct: 284 LYNTGNSCYFNSTMQALSSCPSLVSRFEMLHRLRHGNYLECPSYDLRPKFAVFESCLRMM 343
Query: 422 ---ADLFYSIATQKKKVGSIAPKKFI-ARLR--KEKEEFDNYMQQDAHEFLNFLINHINE 583
+D + ++ ++ S + + RL+ + +EFDN Q+DAHE+L L++ +++
Sbjct: 344 VKLSDRMENPHLKEYRLPSFSETELANTRLKIGRVVKEFDNNDQKDAHEYLTELLSCVDD 403
Query: 584 II 589
I+
Sbjct: 404 IM 405
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.069
Identities = 29/133 (21%), Positives = 58/133 (43%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 463
GL N GNTCY N++LQ L C F + K ++ + + L++L + + +
Sbjct: 46 GLANQGNTCYMNALLQGLASCPSFVGWLKSLKPQDIGIQGGFVDHLSNLLHLL--NEPTG 103
Query: 464 GSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGE 643
++ + + L+ ++ D +E N + + + +S+ ++ N S E
Sbjct: 104 STLTAQSIVESLKAHGWSITVGVEHDLYELFNVFVTTWEDEL-----KSSRRILMNQSIE 158
Query: 644 NVTCNGSVPHNTE 682
N C+ S + E
Sbjct: 159 N--CHSSSSEDDE 169
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +2
Query: 287 LVNFGNTCYSNSVLQALYFCRP 352
LVN GN+CY NS LQA+ C P
Sbjct: 36 LVNTGNSCYYNSTLQAMSSCGP 57
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 287 LVNFGNTCYSNSVLQALYFCRP 352
LVN GN+CY NS +QA+ C P
Sbjct: 216 LVNTGNSCYYNSTMQAVSSCNP 237
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 503 KEKEEFDNYMQQDAHEFLNFLINHINEII-LAERNQSTL 616
K EEF+N QQDAHEFL LI +++ + + +N T+
Sbjct: 313 KINEEFNNDDQQDAHEFLLTLIGAVDDAMGVMSKNVKTI 351
>Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical
protein F29F11.1 protein.
Length = 481
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +2
Query: 215 GANISQLERDIGSEQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFR-EKVLEY----- 376
GA IS++ +G + ++ V FG +C+ VL +Y C +V +Y
Sbjct: 252 GAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVI 311
Query: 377 KAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKK 484
N + + +A+LF ++ +K + A KK
Sbjct: 312 NINNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKK 347
>AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose
dehydrogenase protein.
Length = 481
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 6/96 (6%)
Frame = +2
Query: 215 GANISQLERDIGSEQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFR-EKVLEY----- 376
GA IS++ +G + ++ V FG +C+ VL +Y C +V +Y
Sbjct: 252 GAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVI 311
Query: 377 KAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKK 484
N + + +A+LF ++ +K + A KK
Sbjct: 312 NINNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKK 347
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 287 LVNFGNTCYSNSVLQALYFCRP 352
LVN GN+CY NS +QA+ C P
Sbjct: 216 LVNTGNSCYYNSTMQAVSSCNP 237
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 503 KEKEEFDNYMQQDAHEFLNFLINHINEII-LAERNQSTL 616
K EEF+N QQDAHEFL LI +++ + + +N T+
Sbjct: 313 KINEEFNNDDQQDAHEFLLTLIGAVDDAMGVMSKNVKTI 351
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 32.7 bits (71), Expect = 0.28
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALY----FCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQ 451
GL N GNTC+ ++ LQ L+ F +KV K N +++ ++ F S++
Sbjct: 25 GLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKV-NTQSRLGSKGVISAGFASLSDM 83
Query: 452 --KKKVGSIAPKKFIARLRKE-KEEFDNYMQQDAHEFLNFLINHINE 583
+I P +F+ + + Q DA EF FL++ ++E
Sbjct: 84 IWNGTFTAIRPSRFLQLFSDTVYQPLSDGRQHDASEFQIFLLDALHE 130
>U58752-3|AAB00666.1| 367|Caenorhabditis elegans Hypothetical
protein B0218.5 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.6
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 356 REKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQ 535
REKVL+YK K+ RT + + +ADLFY+ P K R+ K +E D Y +
Sbjct: 242 REKVLKYK-KDVRTDKEI---MADLFYN-----------CPLKEFERILKYVDELDFYSE 286
Query: 536 QDAHEFLNFLINH 574
D ++F+ + H
Sbjct: 287 PD-YKFVYCCLQH 298
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Frame = +2
Query: 284 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYK--AKNKRTKETLLTCL----ADLFYSIA 445
GL N Y N++LQAL RP R L+ KR LT L +L +
Sbjct: 257 GLNNIKANDYCNAILQALSAVRPLRNWFLKESNYTSIKRPPGDKLTLLPQRFGELIRKLW 316
Query: 446 TQKKKVGSIAPKKFI-ARLRKEKEEFDNYMQQDAHEFLNFLINHINEII 589
+ ++P + + A + ++F Q DA +F+ FL+ ++ +
Sbjct: 317 NPRALRTHVSPHEMLQAVVVCSNKKFQFIKQNDAADFMLFLLTTLHSAL 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,027,586
Number of Sequences: 27780
Number of extensions: 359357
Number of successful extensions: 984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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