Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28m21
         (339 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X92663-1|CAA63351.1|  232|Drosophila melanogaster ubiquitin-conj...    27   4.7  
BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p pro...    27   4.7  
AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p pro...    27   4.7  
AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p pro...    27   4.7  
AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2 p...    27   4.7  
AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB...    27   4.7  
AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA...    27   4.7  

>X92663-1|CAA63351.1|  232|Drosophila melanogaster
           ubiquitin-conjugating enzyme UbcD2 protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 337 FFL*IN*N-NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQP 203
           FFL I+ +  Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 135 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>BT024449-1|ABC86511.1| 1403|Drosophila melanogaster GH15984p protein.
          Length = 1403

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 4    LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 177
            L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 990  LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 1049

Query: 178  I*VQTGV-SQVGFYLL 222
            + +Q G+ +++G YL+
Sbjct: 1050 VAMQKGMKTEMGSYLM 1065


>AY118968-1|AAM50828.1|  531|Drosophila melanogaster LD45876p
           protein.
          Length = 531

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 4   LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 177
           L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 118 LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 177

Query: 178 I*VQTGV-SQVGFYLL 222
           + +Q G+ +++G YL+
Sbjct: 178 VAMQKGMKTEMGSYLM 193


>AY094899-1|AAM11252.1|  232|Drosophila melanogaster RE74673p
           protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 337 FFL*IN*N-NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQP 203
           FFL I+ +  Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 135 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>AL031884-3|CAA21413.1|  658|Drosophila melanogaster EG:23E12.2
           protein.
          Length = 658

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 18/76 (23%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
 Frame = +1

Query: 4   LNDPILLIKRKNYLRDNSVIFFFSSNKKKSLRPRCWIKIKFKCRSLKF*SVRSLK--SYM 177
           L  P L+++  N   + ++ FF SS+ +++      + +K KC      ++ SL+  +++
Sbjct: 298 LATPNLVLRLGNKANNKTITFFLSSDFERTQWIDSILSLKQKCNLPGANTINSLEVTAFI 357

Query: 178 I*VQTGV-SQVGFYLL 222
           + +Q G+ +++G YL+
Sbjct: 358 VAMQKGMKTEMGSYLM 373


>AE014134-1951|AAN10762.1|  232|Drosophila melanogaster CG6720-PB,
           isoform B protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 337 FFL*IN*N-NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQP 203
           FFL I+ +  Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 135 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


>AE014134-1950|AAF53008.1|  232|Drosophila melanogaster CG6720-PA,
           isoform A protein.
          Length = 232

 Score = 27.5 bits (58), Expect = 4.7
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 337 FFL*IN*N-NY*FK*NLIKFNTTQYNCNI*SFRTKIL*ILKDRNQP 203
           FFL I+ +  Y FK   + F T  Y+CNI S     L ILKD   P
Sbjct: 135 FFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSP 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,335,010
Number of Sequences: 53049
Number of extensions: 156578
Number of successful extensions: 238
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)