Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28m11
         (188 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    28   1.5  
U36232-1|AAC47269.1|  168|Drosophila melanogaster 6-pyruvoyltetr...    26   6.0  
AY061078-1|AAL28626.1|  168|Drosophila melanogaster LD05512p pro...    26   6.0  
AE014134-3198|AAN11065.1|  168|Drosophila melanogaster CG16784-P...    26   6.0  
AE014134-3197|AAN11064.1|  168|Drosophila melanogaster CG16784-P...    26   6.0  

>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 90  RASGISKKNRTSFECSSNGPETEXMPR 170
           RA+   KKN  ++ C SN  E E  PR
Sbjct: 205 RAAPRKKKNNETYACDSNSNEVEVKPR 231


>U36232-1|AAC47269.1|  168|Drosophila melanogaster
           6-pyruvoyltetrahydropterin synthaseprotein.
          Length = 168

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
 Frame = -2

Query: 157 SVSGPLDEHSNDVLFFFDMPEALSL---------HLTPFSPWFCLTPSEGPTVSAYVWD 8
           +V GP+D  +  VL   ++ EA+           +L     +F  TPS    ++ Y+WD
Sbjct: 53  TVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWD 111


>AY061078-1|AAL28626.1|  168|Drosophila melanogaster LD05512p
           protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
 Frame = -2

Query: 157 SVSGPLDEHSNDVLFFFDMPEALSL---------HLTPFSPWFCLTPSEGPTVSAYVWD 8
           +V GP+D  +  VL   ++ EA+           +L     +F  TPS    ++ Y+WD
Sbjct: 53  TVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWD 111


>AE014134-3198|AAN11065.1|  168|Drosophila melanogaster CG16784-PC,
           isoform C protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
 Frame = -2

Query: 157 SVSGPLDEHSNDVLFFFDMPEALSL---------HLTPFSPWFCLTPSEGPTVSAYVWD 8
           +V GP+D  +  VL   ++ EA+           +L     +F  TPS    ++ Y+WD
Sbjct: 53  TVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWD 111


>AE014134-3197|AAN11064.1|  168|Drosophila melanogaster CG16784-PB,
           isoform B protein.
          Length = 168

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
 Frame = -2

Query: 157 SVSGPLDEHSNDVLFFFDMPEALSL---------HLTPFSPWFCLTPSEGPTVSAYVWD 8
           +V GP+D  +  VL   ++ EA+           +L     +F  TPS    ++ Y+WD
Sbjct: 53  TVRGPIDRRTGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWD 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,529,653
Number of Sequences: 53049
Number of extensions: 113015
Number of successful extensions: 357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 24,988,368
effective HSP length: 43
effective length of database: 22,707,261
effective search space used: 431437959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)